RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 UBE2NP61088 152 aaKnown RBP16.51■□□□□ 0.23
TRIM58-201ENST00000366481 ALKBH2Q6NS38 261 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 PCSK4Q6UW60 755 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 TEX43Q6ZNM6 134 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 APH1AQ96BI3 265 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 RNF24Q9Y225 148 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 CEP295Q9C0D2 2601 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 ZDHHC16Q969W1 377 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 KIAA1549Q9HCM3 1950 aa16.51■□□□□ 0.23
TRIM58-201ENST00000366481 NEURL1O76050 574 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 ATP1A1-AS1Q5TC04 95 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 ERASQ7Z444 233 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 PRO3102Q9H379 93 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 CADP27708 2225 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 C17orf112F2Z3M2 114 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 CEBPDP49716 269 aaPredicted RBP16.5■□□□□ 0.23
TRIM58-201ENST00000366481 RIPPLY2Q5TAB7 128 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 ZNF324BQ6AW86 544 aaPredicted RBP16.5■□□□□ 0.23
TRIM58-201ENST00000366481 CXorf67Q86X51 503 aaPredicted RBP16.5■□□□□ 0.23
TRIM58-201ENST00000366481 OR2M7Q8NG81 312 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 OR1L1Q8NH94 360 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 LSM10Q969L4 123 aaKnown RBP16.5■□□□□ 0.23
TRIM58-201ENST00000366481 NPCDR1Q9BY65 106 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 DEFB127Q9H1M4 99 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 NAT8BQ9UHF3 227 aa16.5■□□□□ 0.23
TRIM58-201ENST00000366481 SH2D1BO14796 132 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 ZG16O60844 167 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 KRTAP27-1Q3LI81 207 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 UBALD2Q8IYN6 164 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 DEGS1O15121 323 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 PDE6DO43924 150 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 SYNGR4O95473 234 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 ABHD17BQ5VST6 288 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 SMG1Q96Q15 3661 aaKnown RBP16.49■□□□□ 0.23
TRIM58-201ENST00000366481 LHX2P50458 406 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 ACSF3Q4G176 576 aaPredicted RBP16.49■□□□□ 0.23
TRIM58-201ENST00000366481 OR4B1Q8NGF8 309 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 PCSK5Q92824 1860 aa16.49■□□□□ 0.23
TRIM58-201ENST00000366481 DUSP3P51452 185 aaPredicted RBP16.48■□□□□ 0.23
TRIM58-201ENST00000366481 OR1C1Q15619 314 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 CEACAM21Q3KPI0 293 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 UNQ5815/PRO19632Q6UWF5 114 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 OR5A2Q8NGI9 324 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 PRDM14Q9GZV8 571 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 FBXL7Q9UJT9 491 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 BOKQ9UMX3 212 aaPredicted RBP16.48■□□□□ 0.23
TRIM58-201ENST00000366481 LAMTOR2Q9Y2Q5 125 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 TBL2Q9Y4P3 447 aaKnown RBP16.48■□□□□ 0.23
TRIM58-201ENST00000366481 TRAV24A0A0B4J272 114 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 FOXL1Q12952 345 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 OR4C5Q8NGB2 326 aa16.48■□□□□ 0.23
TRIM58-201ENST00000366481 CCL25O15444 150 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 DNPH1O43598 174 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 CELA3BP08861 270 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 TCL1AP56279 114 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 CLDN18P56856 261 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 ALKBH6Q3KRA9 238 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 DHRS13Q6UX07 377 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 APOBEC3DQ96AK3 386 aaPredicted RBP16.47■□□□□ 0.23
TRIM58-201ENST00000366481 UQCR10Q9UDW1 63 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 ZNF391Q9UJN7 358 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 A8MXE2 369 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 ZNF585BQ52M93 769 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 PDLIM3Q53GG5 364 aaPredicted RBP16.47■□□□□ 0.23
TRIM58-201ENST00000366481 ANKRD39Q53RE8 183 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 OCC1Q8TAD7 63 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 SPSB4Q96A44 273 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 ZNF703Q9H7S9 590 aaPredicted RBP16.47■□□□□ 0.23
TRIM58-201ENST00000366481 TIMM9Q9Y5J7 89 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 SCO2A0A1W2PP80 73 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 FRMD6-AS1P0C7T7 363 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 HLA-DRB5Q30154 266 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 TTTY12Q9BZ98 90 aa16.47■□□□□ 0.23
TRIM58-201ENST00000366481 CER1O95813 267 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 IGHEP01854 428 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 FBXW9Q5XUX1 488 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 TMEM251Q8N6I4 163 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 VPS25Q9BRG1 176 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 OTOGLQ3ZCN5 2332 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 RAMP3O60896 148 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 ZNF253O75346 499 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 VAMP3Q15836 100 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 SAPCD1Q5SSQ6 148 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 COLCA1Q6ZS62 124 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 TMEM144Q7Z5S9 345 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 PLPPR2Q96GM1 343 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 TP53TG3Q9ULZ0 132 aa16.46■□□□□ 0.23
TRIM58-201ENST00000366481 SSPNQ14714 243 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 GCNT2Q8N0V5 402 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 OR8I2Q8N0Y5 310 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 FAM19A2Q8N3H0 131 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 RNF2Q99496 336 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 QTRT1Q9BXR0 403 aaKnown RBP16.45■□□□□ 0.22
TRIM58-201ENST00000366481 MT-CO3P00414 261 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 WNT2P09544 360 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 LINC00205P59089 165 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 PLP2Q04941 152 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 KRTCAP3Q53RY4 240 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 TMEM14EPQ6UXP3 125 aa16.45■□□□□ 0.22
TRIM58-201ENST00000366481 MRPL52Q86TS9 123 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms