RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PCDH15Q96QU1 1955 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 NUP160Q12769 1436 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 SETD5Q9C0A6 1442 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 MAP3K19Q56UN5 1328 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 METTL15A6NJ78 407 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 HLA-DQB2P05538 268 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 TFPTP0C1Z6 253 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 UBBP0CG47 229 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 KCNJ3P48549 501 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 FKBP1AP62942 108 aaKnown RBP0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 GPHB5Q86YW7 130 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 ZNF565Q8N9K5 539 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 OR52E4Q8NGH9 312 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 STOML3Q8TAV4 291 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 TESCQ96BS2 214 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 CYTH2Q99418 400 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 METTL9Q9H1A3 318 aa0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 PCYT1BQ9Y5K3 369 aaPredicted RBP0.25□□□□□ -2.37
RNU6-553P-201ENST00000364047 ATP8B1O43520 1251 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 LINC00614P0C842 121 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 F8A1P23610 371 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 SMAGPQ0VAQ4 97 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 C12orf29Q8N999 325 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 ATP6V1C2Q8NEY4 427 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 OR8B3Q8NGG8 313 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 MROQ9BYG7 248 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 TRABDQ9H4I3 376 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 ZNHIT6Q9NWK9 470 aaKnown RBP0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 LHFPL6Q9Y693 200 aa0.24□□□□□ -2.37
RNU6-553P-201ENST00000364047 ARFGEF3Q5TH69 2177 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 TMEM94Q12767 1356 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 TONSLQ96HA7 1378 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 DAPL1A0PJW8 107 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 ITGB1BP1O14713 200 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 SYT1P21579 422 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 FABP5Q01469 135 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 CDK10Q15131 360 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 TEX36Q5VZQ5 186 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 RASSF6Q6ZTQ3 369 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 SPATA24Q86W54 205 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 RAB2BQ8WUD1 216 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 ACOT12Q8WYK0 555 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 SERPINI1Q99574 410 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 TMEM109Q9BVC6 243 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 CD300AQ9UGN4 299 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 PTPRBP23467 1997 aa0.23□□□□□ -2.37
RNU6-553P-201ENST00000364047 GOLGA8QA0A0J9YX86 632 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 TMEM269A0A1B0GVZ9 245 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 GOLGA6L10A6NI86 522 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 SDCBPO00560 298 aaPredicted RBP0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 APOA1P02647 267 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 RNASE3P12724 160 aaKnown RBP0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 MSNP26038 577 aaKnown RBP0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 SLCO1A2P46721 670 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 SYCP1Q15431 976 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 FBXO48Q5FWF7 155 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 FAM27BQ5VT28 67 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 BLIDQ8IZY5 108 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 OR10D3Q8NH80 312 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 PPCDCQ96CD2 204 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 SMARCA4P51532 1647 aa0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 NUP153P49790 1475 aaKnown RBP0.22□□□□□ -2.37
RNU6-553P-201ENST00000364047 BRWD1Q9NSI6 2320 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 THSD7AQ9UPZ6 1657 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 KMT2DO14686 5537 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 NAV1Q8NEY1 1877 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 TMED7-TICAM2A0A0A6YYA0 188 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 TMEM212A6NML5 194 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 TRAPPC2LH3BP13 241 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 CCL5P13501 91 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 GRPRP30550 384 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 CNPY4Q8N129 248 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 MED10Q9BTT4 135 aa0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 DSTQ03001 7570 aaKnown RBP0.21□□□□□ -2.38
RNU6-553P-201ENST00000364047 TRAV14DV4A0A0A6YYC5 116 aa0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 A0A1B0GW54 56 aa0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 ADAP1O75689 374 aa0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 CXCL2P19875 107 aa0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 MIPP30301 263 aa0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 RPL30P62888 115 aaKnown RBP0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 FAM45BPQ6NSW5 357 aa0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 DHFR2Q86XF0 187 aa0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 CPAMD8Q8IZJ3 1885 aa0.2□□□□□ -2.38
RNU6-553P-201ENST00000364047 KIF24Q5T7B8 1368 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 MDN1Q9NU22 5596 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 SYNRGQ9UMZ2 1314 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 TRBV6-7A0A0A0MS04 114 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 AZIN1O14977 448 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 IVLP07476 585 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 CXCL3P19876 107 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 NDUFA5Q16718 116 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 C4orf26Q17RF5 130 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 DNAL1Q4LDG9 190 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 SAPCD1Q5SSQ6 148 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 SBSPONQ8IVN8 264 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 OR5AK3PQ8NH89 298 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 AQP3Q92482 292 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 YIPF3Q9GZM5 350 aa0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 NSRP1Q9H0G5 558 aaKnown RBP0.19□□□□□ -2.38
RNU6-553P-201ENST00000364047 OR5AC2Q9NZP5 309 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms