RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ZNF580Q9UK33 172 aa10.98□□□□□ -0.65
NSMCE1-201ENST00000361439 KCNIP3Q9Y2W7 256 aa10.98□□□□□ -0.65
NSMCE1-201ENST00000361439 C3orf85A0A1B0GTC6 90 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 CLPSL1A2RUU4 121 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 SRRM4A7MD48 611 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 RAMP3O60896 148 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 ATG12O94817 140 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 SERPINE2P07093 398 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 CRYGBP07316 175 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 PI3P19957 117 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 CNTFRP26992 372 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 SLC6A1P30531 599 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 BTCP35070 178 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 DEFA1P59665 94 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 DEFA3P59666 94 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 PLGLAQ15195 96 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 TMEM128Q5BJH2 165 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 PPP1R27Q86WC6 154 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 SGPP2Q8IWX5 399 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 OR4A5Q8NH83 315 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 LINC01006Q8NI28 216 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 GALNT14Q96FL9 552 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 TSC22D3Q99576 134 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 NAA60Q9H7X0 242 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 METTL1Q9UBP6 276 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 VSIG4Q9Y279 399 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 SIGLEC9Q9Y336 463 aa10.97□□□□□ -0.65
NSMCE1-201ENST00000361439 FBN1P35555 2871 aaKnown RBP10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 TEX13DA0A0J9YY54 714 aaPredicted RBP10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 CRYM-AS1A6NIL9 109 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 SLC25A17O43808 307 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 PEX14O75381 377 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 VSIG10L2P0DP72 767 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 ANXA3P12429 323 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 DHODHQ02127 395 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 ZNF585BQ52M93 769 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 OR2B11Q5JQS5 317 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 ZNF562Q6V9R5 426 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 RHOVQ96L33 236 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 GON7Q9BXV9 100 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 FBXL15Q9H469 300 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 BET1LQ9NYM9 111 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 TBC1D24Q9ULP9 559 aa10.96□□□□□ -0.65
NSMCE1-201ENST00000361439 LINC00854A0A1B0GVQ3 168 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 AP4M1O00189 453 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 OR2A4O95047 310 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 IGF1P05019 195 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 SAA1P0DJI8 122 aaPredicted RBP10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 UCP1P25874 307 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 LPAR6P43657 344 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 VDAC2P45880 294 aaPredicted RBP10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 CCR6P51684 374 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 ERVK-16P61578 105 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 SLC35E3Q7Z769 313 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 FOXRED2Q8IWF2 684 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 PUSL1Q8N0Z8 303 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 CENPSQ8N2Z9 138 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 OR2A7Q96R45 310 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM222Q9H0R3 208 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 PALMDQ9NP74 551 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 RNF114Q9Y508 228 aa10.95□□□□□ -0.66
NSMCE1-201ENST00000361439 MARCH11A6NNE9 402 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 S1PR2O95136 353 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 CDS2O95674 445 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 IL6RP08887 468 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 MAS1LP35410 378 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 SRPXP78539 464 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 PRSS8Q16651 343 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 ARSJQ5FYB0 599 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 C9orf152Q5JTZ5 239 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 SLC25A42Q86VD7 318 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 MMD2Q8IY49 270 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM167AQ8TBQ9 72 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 CHPT1Q8WUD6 406 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 IL22RA2Q969J5 263 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM230Q96A57 120 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 R3HDM4Q96D70 268 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM56Q96MV1 263 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 TP53RKQ96S44 253 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 ALX4Q9H161 411 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 OR51J1Q9H342 316 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 SERTAD4Q9NUC0 356 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM56-RWDD3S4R434 201 aa10.94□□□□□ -0.66
NSMCE1-201ENST00000361439 IGHV7-81A0A0B4J1V7 117 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 FAM240BA0A1B0GVZ2 78 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 KBTBD11O94819 623 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 TCRBP04435 133 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 OR5AC1P0C628 307 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 AKR1C4P17516 323 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 MDKP21741 143 aaPredicted RBP10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 CRIP2P52943 208 aaPredicted RBP10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 PROK1P58294 105 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 CX3CL1P78423 397 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 IFITM3Q01628 133 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 AWAT1Q58HT5 328 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 OR4A47Q6IF82 309 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 Q6ZS46 218 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 TMED4Q7Z7H5 227 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 ADAD2Q8NCV1 583 aaKnown RBP10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 DMBX1Q8NFW5 382 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms