RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 TEX43Q6ZNM6 134 aa6.48□□□□□ -1.37
CCL28-201ENST00000361115 TBC1D26Q86UD7 250 aa6.48□□□□□ -1.37
CCL28-201ENST00000361115 CCDC71LQ8N9Z2 235 aa6.48□□□□□ -1.37
CCL28-201ENST00000361115 PGAM5Q96HS1 289 aa6.48□□□□□ -1.37
CCL28-201ENST00000361115 AGMATQ9BSE5 352 aa6.48□□□□□ -1.37
CCL28-201ENST00000361115 MAP1LC3BQ9GZQ8 125 aa6.48□□□□□ -1.37
CCL28-201ENST00000361115 ASPMQ8IZT6 3477 aa6.48□□□□□ -1.37
CCL28-201ENST00000361115 TRAPPC6AO75865 159 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 OR2J2O76002 312 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 TYMSP04818 313 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 IL3RAP26951 378 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 GNRHRP30968 328 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 HERV-K104P61576 105 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 HIST1H3AP68431 136 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 GUSBP1Q15486 140 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 NMSQ5H8A3 153 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 COL5A1-AS1Q5SY13 56 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 SEM1Q6ZVN7 128 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 GATAD1Q8WUU5 269 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 DPF1Q92782 380 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 TRIB1Q96RU8 372 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 MRPL13Q9BYD1 178 aaKnown RBP6.47□□□□□ -1.37
CCL28-201ENST00000361115 TMEM106BQ9NUM4 274 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 TAAR3PQ9P1P4 343 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 PIGLQ9Y2B2 252 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 ZNF407Q9C0G0 2248 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 EXPH5Q8NEV8 1989 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 A0A1W2PQD3 144 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 H3BML4 177 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 HMGB3O15347 200 aaKnown RBP6.47□□□□□ -1.37
CCL28-201ENST00000361115 IFNA5P01569 189 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 PPBPP02775 128 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 LOXP28300 417 aaPredicted RBP6.47□□□□□ -1.37
CCL28-201ENST00000361115 NPBWR2P48146 333 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 ARL16Q0P5N6 197 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 PLCXD2Q0VAA5 305 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 Q6ZVH6 145 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 MYPOPQ86VE0 399 aaPredicted RBP6.47□□□□□ -1.37
CCL28-201ENST00000361115 STPG4Q8N801 248 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 TMEM56Q96MV1 263 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 PARLQ9H300 379 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 ZNF286AQ9HBT8 521 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 MANBALQ9NQG1 85 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 TMEM56-RWDD3S4R434 201 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 SPTBN1Q01082 2364 aaKnown RBP6.47□□□□□ -1.37
CCL28-201ENST00000361115 A0A096LPE4 126 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 A0A1W2PPZ6 126 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 GRIFINA4D1Z8 144 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 DEFB108AA8MXU0 73 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 C16orf97H3BN30 126 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 PPYP01298 95 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 GYPAP02724 150 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 MDH2P40926 338 aaKnown RBP6.47□□□□□ -1.37
CCL28-201ENST00000361115 CLRN1P58418 232 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 LINC00310P59036 64 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 MMDQ15546 238 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 PIGYQ3MUY2 71 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 C1orf159Q96HA4 380 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 SPIN2AQ99865 258 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 SPIN2BQ9BPZ2 258 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 WWTR1Q9GZV5 400 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 RNF150Q9ULK6 438 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 TP53TG3Q9ULZ0 132 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 TRAPPC1Q9Y5R8 145 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 CREBBPQ92793 2442 aa6.47□□□□□ -1.37
CCL28-201ENST00000361115 IGKV1-27A0A075B6S5 117 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 IGLV3-32A0A0A0MS00 114 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 A0A0G2JRQ6 117 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 A0A1W2PNV4 684 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 F5H5K5 113 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 TNFRSF6BO95407 300 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 IGLV3-1P01715 115 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 GDF1P27539 372 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 SELENOTP62341 195 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 MEF2BQ02080 365 aaPredicted RBP6.46□□□□□ -1.37
CCL28-201ENST00000361115 IZUMO4Q1ZYL8 232 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 SPIN3Q5JUX0 258 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 FAM78BQ5VT40 261 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 HLA-DQA1Q5Y7H0 255 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 TCF23Q7RTU1 214 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 DTX2Q86UW9 622 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 VN1R17PQ8TDU5 208 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 VDAC3Q9Y277 283 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 RNF114Q9Y508 228 aa6.46□□□□□ -1.37
CCL28-201ENST00000361115 IGHV3-20A0A0C4DH32 117 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 A0A1W2PR80 420 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 NKX6-3A6NJ46 265 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 IGKV1D-33P01593 117 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 IGKV1-33P01594 117 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 NBEAP1P0C6P0 100 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 SRSF2Q01130 221 aaKnown RBP6.46□□□□□ -1.38
CCL28-201ENST00000361115 PRDX4Q13162 271 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 C3orf36Q3SXR2 165 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 HAPLN4Q86UW8 402 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 SLC35E1Q96K37 410 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 PLK3Q9H4B4 646 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 AKAP9Q99996 3911 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 ZGRF1Q86YA3 2104 aa6.46□□□□□ -1.38
CCL28-201ENST00000361115 NPIPB13A6NJU9 1138 aa6.45□□□□□ -1.38
CCL28-201ENST00000361115 FAM166BA8MTA8 275 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms