RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 HOGA1Q86XE5 327 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 PPIAL4AQ9Y536 164 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 EML2O95834 649 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 ISXQ2M1V0 245 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 FBXW9Q5XUX1 488 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 NDUFAF3Q9BU61 184 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 SERGEFQ9UGK8 458 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 A0A0G2JLM5 398 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 TMEM262E9PQX1 116 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 TSPAN7P41732 249 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 CXCL16Q9H2A7 254 aa11.45□□□□□ -0.58
SRGAP3-201ENST00000360413 APOMO95445 188 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 ZFAND6Q6FIF0 208 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 CNTFRP26992 372 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 MESTQ5EB52 335 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 EEF1AKMT3Q96AZ1 226 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 PSME4Q14997 1843 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A26D6RGX4 464 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 UCP3P55916 312 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 SOX8P57073 446 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 CCL4L1Q8NHW4 92 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 WNK3Q9BYP7 1800 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 DOCK4Q8N1I0 1966 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 SRSF4Q08170 494 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 OR11H4Q8NGC9 324 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 GPX1P07203 203 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 SNAI3Q3KNW1 292 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 RPL27AP46776 148 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 ATP5G2Q06055 141 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 ZNF56Q15929 161 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 RIPPLY2Q5TAB7 128 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 TTC9CQ8N5M4 171 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 PRSS27Q9BQR3 290 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 PLA2G3Q9NZ20 509 aa11.44□□□□□ -0.58
SRGAP3-201ENST00000360413 A0A1B0GW15 77 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 TMEM196Q5HYL7 178 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 C5orf30Q96GV9 206 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 DLL1O00548 723 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 ISG15P05161 165 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 ANOS1P23352 680 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 A0A0U1RQV5 110 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 Q6ZNB5 142 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 MRPL32Q9BYC8 188 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 H0Y980 276 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 NOVP48745 357 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 RNFT1Q5M7Z0 435 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 TAF15Q92804 592 aaKnown RBP eCLIP11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 DUX5Q96PT3 197 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 ATP5LO75964 103 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 LINC00869P0C866 280 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 ZFP36L2P47974 494 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 PCSK4Q6UW60 755 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 APCDD1LQ8NCL9 501 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 AHRRA9YTQ3 701 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 SSTR5P35346 364 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 HBBP68871 147 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 VAX1Q5SQQ9 334 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 TMEM252Q8N6L7 170 aa11.43□□□□□ -0.58
SRGAP3-201ENST00000360413 CTSVO60911 334 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 MALP21145 153 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 HIKESHIQ53FT3 197 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 ZNF645Q8N7E2 425 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 RTN4RQ9BZR6 473 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 KIAA0040Q15053 153 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 WFDC3Q8IUB2 231 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 TNFRSF18Q9Y5U5 241 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 H2BFSP57053 126 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 OR2K2Q8NGT1 345 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 SRSF12Q8WXF0 261 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 DNASE2BQ8WZ79 361 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 C18orf15Q96N68 181 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 EDIL3O43854 480 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 CFAP161Q6P656 301 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 FLRT3Q9NZU0 649 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 CCL27Q9Y4X3 112 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 hCG_38984A0A1B0GV85 526 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 LINC01549A6NIU2 74 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 FOXH1O75593 365 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 CX3CL1P78423 397 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 PSG6Q00889 435 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 SPSB4Q96A44 273 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 SRSF5Q13243 272 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 HMGCLL1Q8TB92 370 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 RPL36A-HNRNPH2H7BZ11 118 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 FUT5Q11128 374 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 DEFB124Q8NES8 71 aa11.42□□□□□ -0.58
SRGAP3-201ENST00000360413 C2CD4DB7Z1M9 353 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 PATE4P0C8F1 98 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 SPINK2P20155 84 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 CEACAM4O75871 244 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 DPH3P1Q9H4G8 78 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 HILPDAQ9Y5L2 63 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 MRPS18BQ9Y676 258 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 CGB1A6NKQ9 187 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 PAX1P15863 534 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms