RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TM4SF19Q96DZ7 209 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 NRXN2Q9P2S2 1712 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 TRAV14DV4A0A0A6YYC5 116 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 RBFOX2O43251 390 aaKnown RBP eCLIP7.58□□□□□ -1.2
COL6A6-201ENST00000358511 TNXAQ16473 311 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF324BQ6AW86 544 aaPredicted RBP7.58□□□□□ -1.2
COL6A6-201ENST00000358511 A0A1B0GWB2 263 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 TMEM189A5PLL7 270 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 MARCH11A6NNE9 402 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 SNAI3Q3KNW1 292 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 WNK1Q9H4A3 2382 aa7.58□□□□□ -1.2
COL6A6-201ENST00000358511 IGHV3OR16-12A0A075B7B8 117 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 A0A1B0GTI1 187 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 GDF9O60383 454 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 IL36BQ9NZH7 164 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 COLCA2A8K830 154 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 PIN1P1O15428 100 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 RIPPLY3P57055 190 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 ST6GALNAC3Q8NDV1 305 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 HYPMO75409 117 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 ZNF735P0CB33 412 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 FGF12P61328 243 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 IL11RAQ14626 422 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 RTP5Q14D33 572 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 ZAR1Q86SH2 424 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 SRD5A2P31213 254 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 HES3Q5TGS1 186 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 MIC13Q5XKP0 118 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 CHRNA10Q9GZZ6 450 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 PLSCR2Q9NRY7 297 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 KIAA1549LQ6ZVL6 1849 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 PRR14LQ5THK1 2151 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.57□□□□□ -1.2
COL6A6-201ENST00000358511 A0A1W2PPV9 198 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 CEACAM18A8MTB9 384 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 J3QT63 122 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 CLDN14O95500 239 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 MGPP08493 103 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 CTGFP29279 349 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 UCP3P55916 312 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 RPL31P62899 125 aaKnown RBP7.57□□□□□ -1.2
COL6A6-201ENST00000358511 SRSF3P84103 164 aaKnown RBP7.57□□□□□ -1.2
COL6A6-201ENST00000358511 SARGQ9BW04 601 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 C3orf80F5H4A9 247 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 MT-CO3P00414 261 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 OR4D5Q8NGN0 318 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 RPRMQ9NS64 109 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 IGHV5-51A0A0C4DH38 117 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 CENPVL1A0A0U1RR11 272 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 PPIHO43447 177 aaKnown RBP7.57□□□□□ -1.2
COL6A6-201ENST00000358511 SERF1AO75920 110 aa7.57□□□□□ -1.2
COL6A6-201ENST00000358511 TBX6O95947 436 aaPredicted RBP7.57□□□□□ -1.2
COL6A6-201ENST00000358511 CDIPTO14735 213 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 DLEU1O43261 78 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 CA7P43166 264 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 C7orf71A4D174 169 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 HRKO00198 91 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
COL6A6-201ENST00000358511 PRSS8Q16651 343 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 FBXO46Q6PJ61 603 aaPredicted RBP7.56□□□□□ -1.2
COL6A6-201ENST00000358511 Q96M66 194 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 REG4Q9BYZ8 158 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 TRAV39A0A0B4J263 110 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 DXOO77932 396 aaKnown RBP7.56□□□□□ -1.2
COL6A6-201ENST00000358511 STPG3Q8N7X2 389 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 NPCDR1Q9BY65 106 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 RTN4RQ9BZR6 473 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 MEGF9Q9H1U4 602 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 FZR1Q9UM11 496 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 A0A0G2JK05 382 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 A0A1W2PRS3 328 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 MAJINQ3KP22 176 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 KRTCAP3Q53RY4 240 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 IGKV3D-11A0A0A0MRZ8 115 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 MSGN1A6NI15 193 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 IGKV3-11P04433 115 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 CD5P06127 495 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 FOXC1Q12948 553 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 GAB4Q2WGN9 574 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 TEX29Q8N6K0 151 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 CADM4Q8NFZ8 388 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 ORAOV1Q8WV07 137 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 C5orf30Q96GV9 206 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 PRDM14Q9GZV8 571 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 NCOR1P1Q9H4R4 102 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 RAXQ9Y2V3 346 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 FGF16O43320 207 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 IZUMO4Q1ZYL8 232 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 WNT5BQ9H1J7 359 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 NRN1Q9NPD7 142 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 PGLYRP1O75594 196 aaPredicted RBP7.56□□□□□ -1.2
COL6A6-201ENST00000358511 CEACAM21Q3KPI0 293 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 SHISA3A0PJX4 238 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 TMPRSS2O15393 492 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 SCTP09683 121 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 CEACAM3P40198 252 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 HYAL1Q12794 435 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 ICAM4Q14773 271 aa7.56□□□□□ -1.2
COL6A6-201ENST00000358511 GTF3AQ92664 365 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms