RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 OR4X2Q8NGF9 303 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 SOD3P08294 240 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 ZNF645Q8N7E2 425 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 F12P00748 615 aaPredicted RBP14.89□□□□□ -0.03
COL27A1-201ENST00000356083 RIPPLY3P57055 190 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 ST6GAL2Q96JF0 529 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 TMEM30AQ9NV96 361 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 MRM2Q9UI43 246 aaKnown RBP14.89□□□□□ -0.03
COL27A1-201ENST00000356083 CDC42EP2O14613 210 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 SNAI2O43623 268 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 CTSSP25774 331 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 WDR82Q6UXN9 313 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 OR10AG1Q8NH19 301 aa14.89□□□□□ -0.03
COL27A1-201ENST00000356083 CTXND1A0A1B0GTU2 59 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 UPK3AO75631 287 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 HPRT1P00492 218 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 MPV17P39210 176 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 ATP1A1-AS1Q5TC04 95 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 HBBP68871 147 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 RUNX1Q01196 453 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 TCRBV5S2A0A599 114 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 FOXH1O75593 365 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 MVDP53602 400 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 CFDP00746 253 aaPredicted RBP14.88□□□□□ -0.03
COL27A1-201ENST00000356083 MIC13Q5XKP0 118 aa14.88□□□□□ -0.03
COL27A1-201ENST00000356083 SBF1O95248 1867 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 IGHV3-11P01762 117 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 LDLRAD2Q5SZI1 272 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 GFI1BQ5VTD9 330 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 TMEM42Q69YG0 159 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 QTRT1Q9BXR0 403 aaKnown RBP14.87□□□□□ -0.03
COL27A1-201ENST00000356083 LIPFP07098 398 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 WFIKKN1Q96NZ8 548 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 DNAJC4Q9NNZ3 241 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 PRSS42Q7Z5A4 293 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 IGHV1-69-2A0A0G2JMI3 117 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 RPL36A-HNRNPH2H7BZ11 118 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 CYB561D1Q8N8Q1 229 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 ZBTB34Q8NCN2 500 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 MRPL18Q9H0U6 180 aaKnown RBP14.87□□□□□ -0.03
COL27A1-201ENST00000356083 ALX4Q9H161 411 aaPredicted RBP14.87□□□□□ -0.03
COL27A1-201ENST00000356083 CST9LQ9H4G1 147 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 TMEM106BQ9NUM4 274 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 TRGV4A0A0C4DH28 118 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 XIRP1Q702N8 1843 aaKnown RBP14.87□□□□□ -0.03
COL27A1-201ENST00000356083 RRHO14718 337 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 SPRED2Q7Z698 418 aa14.87□□□□□ -0.03
COL27A1-201ENST00000356083 A0A0U1RQV5 110 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 C7orf69Q9H7B7 122 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 MOSP00540 346 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 SEMA5BQ9P283 1151 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 HOXA6P31267 233 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 SF3B5Q9BWJ5 86 aaKnown RBP14.86□□□□□ -0.03
COL27A1-201ENST00000356083 TRPM7Q96QT4 1865 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 TCRBV4S1A1TA0A5B7 111 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 SRSF7Q16629 238 aaKnown RBP eCLIP14.86□□□□□ -0.031e-7■□□□□ 10.1
COL27A1-201ENST00000356083 PRSS53Q2L4Q9 553 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 CLEC19AQ6UXS0 136 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 DEFB104AQ8WTQ1 72 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 ATP6V0CP27449 155 aa14.86□□□□□ -0.03
COL27A1-201ENST00000356083 OR2H2O95918 312 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 OR5A1Q8NGJ0 315 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 ANKRD20A5PA0PJZ0 165 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 AHRRA9YTQ3 701 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 IL11P20809 199 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 NPC2P61916 151 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 PKIAP61925 76 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 COX19Q49B96 90 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 CLEC7AQ9BXN2 247 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 PARD6GQ9BYG4 376 aaPredicted RBP14.85□□□□□ -0.03
COL27A1-201ENST00000356083 NEU3Q9UQ49 428 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 IGHV3-64A0A075B6Q5 118 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 RPL32P62910 135 aaKnown RBP14.85□□□□□ -0.03
COL27A1-201ENST00000356083 ICAM4Q14773 271 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 FAM214BQ7L5A3 538 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 HELZP42694 1942 aaKnown RBP14.85□□□□□ -0.03
COL27A1-201ENST00000356083 OR51G1Q8NGK1 321 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 CDC42EP3Q9UKI2 254 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 GPR183P32249 361 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 ACSF3Q4G176 576 aaPredicted RBP14.85□□□□□ -0.03
COL27A1-201ENST00000356083 RIMKLAQ8IXN7 391 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 LOC390937A0A1W2PQ73 354 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 FAM71F2Q6NXP2 309 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 MMD2Q8IY49 270 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 SSBP3Q9BWW4 388 aaPredicted RBP14.85□□□□□ -0.03
COL27A1-201ENST00000356083 IDI2-AS1Q9NZ38 188 aa14.85□□□□□ -0.03
COL27A1-201ENST00000356083 NPIPB4C9JG80 1138 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 ASCL4Q6XD76 172 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 LINC00596Q86U02 117 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 JMJD8Q96S16 334 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 ATP5LO75964 103 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 PRR33A8MZF0 331 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 DRD3P35462 400 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 VDAC2P45880 294 aaPredicted RBP14.84□□□□□ -0.03
COL27A1-201ENST00000356083 C7orf77A4D0Y5 90 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 TMEM250H0YL14 139 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 CRYBB3P26998 211 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 UNC119Q13432 240 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 S100A7L2Q5SY68 101 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 SUMO4Q6EEV6 95 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms