RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 UBE2KP61086 200 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 ARSJQ5FYB0 599 aaPredicted RBP12.35□□□□□ -0.43
TRIM13-201ENST00000356017 SGPP2Q8IWX5 399 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 TEX45Q8NA69 505 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
TRIM13-201ENST00000356017 TBC1D24Q9ULP9 559 aa12.35□□□□□ -0.43
TRIM13-201ENST00000356017 CRYM-AS1A6NIL9 109 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 SRRM4A7MD48 611 aaKnown RBP12.34□□□□□ -0.43
TRIM13-201ENST00000356017 SLC25A17O43808 307 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 HLA-DRB1P01911 266 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 AKR1C4P17516 323 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 LPAR6P43657 344 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 IFITM3Q01628 133 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 TMED4Q7Z7H5 227 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 RHOVQ96L33 236 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 C19orf24Q9BVV8 132 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 FBXL15Q9H469 300 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 NAA60Q9H7X0 242 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 ZNF702PQ9H963 129 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 BEX1Q9HBH7 125 aa12.34□□□□□ -0.43
TRIM13-201ENST00000356017 FAM240BA0A1B0GVZ2 78 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 TMEM89A2RUT3 159 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 KCNAB3O43448 404 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 CREBL2O60519 120 aaPredicted RBP12.33□□□□□ -0.43
TRIM13-201ENST00000356017 VSIG10L2P0DP72 767 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 ZNF585BQ52M93 769 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 TMEM128Q5BJH2 165 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 C9orf152Q5JTZ5 239 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 GALNT14Q96FL9 552 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 SIGLEC9Q9Y336 463 aa12.33□□□□□ -0.43
TRIM13-201ENST00000356017 C2CD3Q4AC94 2353 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 ATG12O94817 140 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 OR2A4O95047 310 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 S1PR2O95136 353 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 IGHG2P01859 326 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 ANXA3P12429 323 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 ERVK-16P61578 105 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 DHODHQ02127 395 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 POU2AF1Q16633 256 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 KRTAP21-3Q3LHN1 58 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 ADAD2Q8NCV1 583 aaKnown RBP12.33□□□□□ -0.44
TRIM13-201ENST00000356017 LINC01006Q8NI28 216 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 TP53RKQ96S44 253 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 MMP24Q9Y5R2 645 aa12.33□□□□□ -0.44
TRIM13-201ENST00000356017 PIGBOS1A0A0B4J2F0 54 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 CLPSL1A2RUU4 121 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 MARCH11A6NNE9 402 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 TCRBP04435 133 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 CRYGBP07316 175 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 SAA1P0DJI8 122 aaPredicted RBP12.32□□□□□ -0.44
TRIM13-201ENST00000356017 UCP1P25874 307 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 UBE2MP61081 183 aaKnown RBP12.32□□□□□ -0.44
TRIM13-201ENST00000356017 ZNF562Q6V9R5 426 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 SLC35E3Q7Z769 313 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 FOXRED2Q8IWF2 684 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 CADM3Q8N126 398 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 DMBX1Q8NFW5 382 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 OR4A5Q8NH83 315 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 TAF15Q92804 592 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM13-201ENST00000356017 TMEM230Q96A57 120 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 R3HDM4Q96D70 268 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 TMEM222Q9H0R3 208 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 PALMDQ9NP74 551 aa12.32□□□□□ -0.44
TRIM13-201ENST00000356017 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
TRIM13-201ENST00000356017 OR5AC1P0C628 307 aa12.31□□□□□ -0.44
TRIM13-201ENST00000356017 VDAC2P45880 294 aaPredicted RBP12.31□□□□□ -0.44
TRIM13-201ENST00000356017 TRIM16LQ309B1 348 aa12.31□□□□□ -0.44
TRIM13-201ENST00000356017 SP6Q3SY56 376 aa12.31□□□□□ -0.44
TRIM13-201ENST00000356017 Q6ZS46 218 aa12.31□□□□□ -0.44
TRIM13-201ENST00000356017 SLC25A42Q86VD7 318 aa12.31□□□□□ -0.44
TRIM13-201ENST00000356017 VKORC1L1Q8N0U8 176 aa12.31□□□□□ -0.44
TRIM13-201ENST00000356017 ENKURQ8TC29 256 aa12.31□□□□□ -0.44
TRIM13-201ENST00000356017 BET1LQ9NYM9 111 aa12.31□□□□□ -0.44
TRIM13-201ENST00000356017 KBTBD11O94819 623 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 CDS2O95674 445 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 KRASP01116 189 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 SRPXP78539 464 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 OR4A47Q6IF82 309 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 MMD2Q8IY49 270 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 PUSL1Q8N0Z8 303 aaKnown RBP12.3□□□□□ -0.44
TRIM13-201ENST00000356017 TMEM167AQ8TBQ9 72 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 GLYATL2Q8WU03 294 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 ALX4Q9H161 411 aaPredicted RBP12.3□□□□□ -0.44
TRIM13-201ENST00000356017 C20orf85Q9H1P6 137 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
TRIM13-201ENST00000356017 IGHV7-81A0A0B4J1V7 117 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 AP4M1O00189 453 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 FCN1O00602 326 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 ARPC1BO15143 372 aaKnown RBP12.29□□□□□ -0.44
TRIM13-201ENST00000356017 ACTL6BO94805 426 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 CA2P00918 260 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 FGF2P09038 288 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 MDKP21741 143 aaPredicted RBP12.29□□□□□ -0.44
TRIM13-201ENST00000356017 VAMP1P23763 118 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 COMPP49747 757 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms