RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 PGLYRP1O75594 196 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-201ENST00000355766 CYB5R3P00387 301 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-201ENST00000355766 IGHV2-70P01814 119 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 SERPINE2P07093 398 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 OR5AC1P0C628 307 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 IGKV1-13P0DP09 117 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 MMP9P14780 707 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 GATA3P23771 443 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 PSMB6P28072 239 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 SSTR5P35346 364 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 CEACAM6P40199 344 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 GLIPR1P48060 266 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 CEBPDP49716 269 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-201ENST00000355766 TMEM33P57088 247 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 LOXL3P58215 753 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 EIF4EBP1Q13541 118 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-201ENST00000355766 SLC9A3R2Q15599 337 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 SPRNQ5BIV9 151 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 C11orf87Q6NUJ2 197 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 HEPN1Q6WQI6 88 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 ZNF767PQ75MW2 155 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 TBC1D26Q86UD7 250 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 ZBTB8BQ8NAP8 495 aaPredicted RBP5.64□□□□□ -1.51
VPS13A-201ENST00000355766 ZNRF1Q8ND25 227 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 C8orf46Q8TAG6 207 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 THAP6Q8TBB0 222 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 MRGPRDQ8TDS7 321 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 GLYATL2Q8WU03 294 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 PPP1R1CQ8WVI7 109 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 SECTM1Q8WVN6 248 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 CCL17Q92583 94 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 TAF15Q92804 592 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS13A-201ENST00000355766 RAB1CQ92928 201 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 TNFRSF14Q92956 283 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 ADTRPQ96IZ2 230 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 CYYR1Q96J86 154 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 CITED1Q99966 193 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 AGMATQ9BSE5 352 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 OR2S2Q9NQN1 319 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 OR1A1Q9P1Q5 309 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 GNG12Q9UBI6 72 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 MIOXQ9UGB7 285 aa5.64□□□□□ -1.51
VPS13A-201ENST00000355766 PAIP2BQ9ULR5 123 aaKnown RBP5.64□□□□□ -1.51
VPS13A-201ENST00000355766 IGHV3OR15-7A0A075B7D8 119 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 A0A1B0GU03 582 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 A0A1B0GUS0 222 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 hCG_1809904A0A1W2PP81 198 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 A0A1W2PPE2 198 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 A0A1W2PR64 198 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 A0A1W2PRV1 198 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 C5orf51A6NDU8 294 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 FAM90A26D6RGX4 464 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 MPC2O95563 127 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 IGLV2-14P01704 120 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 IGHV2-5P01817 119 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 FGF2P09038 288 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 COL8A2P25067 703 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 EDDM3BP56851 147 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 RPL31P62899 125 aaKnown RBP5.63□□□□□ -1.51
VPS13A-201ENST00000355766 EDDM3AQ14507 147 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 NDUFA5Q16718 116 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 PHLDA2Q53GA4 152 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 NMSQ5H8A3 153 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 THOC7Q6I9Y2 204 aaKnown RBP5.63□□□□□ -1.51
VPS13A-201ENST00000355766 LAMTOR1Q6IAA8 161 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 PRSS54Q6PEW0 395 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 ZNF695Q8IW36 515 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 LINC00311Q8N616 119 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 DRAM1Q8N682 238 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 FAM216BQ8N7L0 139 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 OR1L1Q8NH94 360 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 ZNF596Q8TC21 504 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 ZNF48Q96MX3 618 aaPredicted RBP5.63□□□□□ -1.51
VPS13A-201ENST00000355766 ZNF714Q96N38 554 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 AQP10Q96PS8 301 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 NEU1Q99519 415 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 ABHD14AQ9BUJ0 271 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 METTL8Q9H825 291 aaKnown RBP5.63□□□□□ -1.51
VPS13A-201ENST00000355766 RPUSD1Q9UJJ7 312 aaKnown RBP5.63□□□□□ -1.51
VPS13A-201ENST00000355766 TNFSF18Q9UNG2 199 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 HSPB11Q9Y547 144 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
VPS13A-201ENST00000355766 KIAA2026Q5HYC2 2103 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 MARCH11A6NNE9 402 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 RAB29O14966 203 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 ADAM20O43506 726 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 GYPAP02724 150 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 RLN2P04090 185 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 OR8U9P0C7N5 309 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 OMGP23515 440 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 S100A11P31949 105 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 NUP62P37198 522 aaPredicted RBP5.62□□□□□ -1.51
VPS13A-201ENST00000355766 ZNF137PP52743 207 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 EIF5AP63241 154 aaKnown RBP5.62□□□□□ -1.51
VPS13A-201ENST00000355766 SMCO1Q147U7 214 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 C17orf58Q2M2W7 97 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 C2orf68Q2NKX9 166 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 IAH1Q2TAA2 248 aaPredicted RBP5.62□□□□□ -1.51
VPS13A-201ENST00000355766 AARDQ4LEZ3 155 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 MORN2Q502X0 79 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms