RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
RTN3-204ENST00000354497 ZNF488Q96MN9 340 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 RCHY1Q96PM5 261 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 RSRP1Q9BUV0 290 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 SLC2A9Q9NRM0 540 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 VAX2Q9UIW0 290 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 PSMB11A5LHX3 300 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 ZNF732B4DXR9 585 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 PPP5D1E7EU14 171 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 TOMM40O96008 361 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 IGHA1P01876 353 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 MT-ND4P03905 459 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 RLN1P04808 185 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 SLC2A5P22732 501 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 NDUFA6P56556 154 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 SCAND1P57086 179 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 ACTBP60709 375 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 ACTA2P62736 377 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 RPL23AP62750 156 aaKnown RBP8.89□□□□□ -0.99
RTN3-204ENST00000354497 RANP62826 216 aaKnown RBP8.89□□□□□ -0.99
RTN3-204ENST00000354497 ACTG2P63267 376 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 ACTC1P68032 377 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 ACTA1P68133 377 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 PSG3Q16557 428 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 COL5A1-AS1Q5SY13 56 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 BTNL8Q6UX41 500 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 BATF2Q8N1L9 274 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 KLHL30-AS1Q8NEE0 82 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 ZNF671Q8TAW3 534 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 NUDT11Q96G61 164 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 DUX3Q96PT4 197 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 ATG101Q9BSB4 218 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 SLC25A33Q9BSK2 321 aa8.89□□□□□ -0.99
RTN3-204ENST00000354497 ZNF471Q9BX82 626 aaPredicted RBP8.89□□□□□ -0.99
RTN3-204ENST00000354497 PARD6GQ9BYG4 376 aaPredicted RBP8.89□□□□□ -0.99
RTN3-204ENST00000354497 EXOGQ9Y2C4 368 aaKnown RBP8.89□□□□□ -0.99
RTN3-204ENST00000354497 TRAV39A0A0B4J263 110 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 SHISA3A0PJX4 238 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 CBY3A6NI87 242 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 C17orf98A8MV24 154 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 PHOX2AO14813 284 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BKO60814 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 GYPBP06028 91 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 CD1AP06126 327 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BJP06899 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 LIMS3P0CW19 117 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 LIMS4P0CW20 117 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 SCGB1A1P11684 91 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BOP23527 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 PRDX2P32119 198 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 DCTDP32321 178 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BBP33778 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 MYCNOSP40205 109 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 SULT1A1P50225 295 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 EDDM3BP56851 147 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 SMIM11AP58511 58 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BDP58876 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 TAS2R43P59537 309 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BCP62807 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 TNP2Q05952 138 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST2H2BEQ16778 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 IQCJQ1A5X6 159 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 SMIM21Q3B7S5 101 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 UBE2NLQ5JXB2 153 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.88□□□□□ -0.99
RTN3-204ENST00000354497 GGNBP1Q5YKI7 109 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 ADAMTSL5Q6ZMM2 481 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 C16orf82Q7Z2V1 217 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 LINC01551Q86U37 167 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 ZNF329Q86UD4 541 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OSR2Q8N2R0 312 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OR51S1Q8NGJ8 323 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OR6K6Q8NGW6 343 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OR8U1Q8NH10 309 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OR5AK2Q8NH90 309 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BHQ93079 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BNQ99877 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BMQ99879 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HIST1H2BLQ99880 126 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 C20orf144Q9BQM9 153 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 ZNF319Q9P2F9 582 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 HYDINQ4G0P3 5121 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 C20orf202A1L168 122 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 ZNF705EA8MWA4 302 aaPredicted RBP8.88□□□□□ -0.99
RTN3-204ENST00000354497 CST4P01036 141 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OR5H8P0DN80 308 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 IGHV1-8P0DP01 117 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 BRS3P32247 399 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 GNG3P63215 75 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 PLA2G7Q13093 441 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 RBM39Q14498 530 aaKnown RBP8.88□□□□□ -0.99
RTN3-204ENST00000354497 RAB11BQ15907 218 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 DHRS11Q6UWP2 260 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 ACP7Q6ZNF0 438 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 CALHM1Q8IU99 346 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 TMEM183AQ8IXX5 376 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 ZNF676Q8N7Q3 588 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 BBS1Q8NFJ9 593 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OR11H6Q8NGC7 330 aa8.88□□□□□ -0.99
RTN3-204ENST00000354497 OR52L1Q8NGH7 329 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms