RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 LPAR6P43657 344 aa17.54■□□□□ 0.4
SHMT1-203ENST00000354098 FOXL1Q12952 345 aa17.54■□□□□ 0.4
SHMT1-203ENST00000354098 CCDC71LQ8N9Z2 235 aa17.54■□□□□ 0.4
SHMT1-203ENST00000354098 TMEM230Q96A57 120 aa17.54■□□□□ 0.4
SHMT1-203ENST00000354098 SCGB3A2Q96PL1 93 aa17.54■□□□□ 0.4
SHMT1-203ENST00000354098 TP53RKQ96S44 253 aa17.54■□□□□ 0.4
SHMT1-203ENST00000354098 SLC25A21Q9BQT8 299 aaPredicted RBP17.54■□□□□ 0.4
SHMT1-203ENST00000354098 BEX1Q9HBH7 125 aa17.54■□□□□ 0.4
SHMT1-203ENST00000354098 SERTAD4Q9NUC0 356 aa17.54■□□□□ 0.4
SHMT1-203ENST00000354098 HPRT1P00492 218 aa17.53■□□□□ 0.4
SHMT1-203ENST00000354098 SAA1P0DJI8 122 aaPredicted RBP17.53■□□□□ 0.4
SHMT1-203ENST00000354098 KRTAP21-3Q3LHN1 58 aa17.53■□□□□ 0.4
SHMT1-203ENST00000354098 SP6Q3SY56 376 aa17.53■□□□□ 0.4
SHMT1-203ENST00000354098 AWAT1Q58HT5 328 aa17.53■□□□□ 0.4
SHMT1-203ENST00000354098 ARSJQ5FYB0 599 aaPredicted RBP17.53■□□□□ 0.4
SHMT1-203ENST00000354098 C3orf85A0A1B0GTC6 90 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 CLPSL1A2RUU4 121 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 IGHG2P01859 326 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 UBE2KP61086 200 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 PJVKQ0ZLH3 352 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 RBMS2Q15434 407 aaKnown RBP17.52■□□□□ 0.4
SHMT1-203ENST00000354098 SSX9Q7RTT3 188 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 TMED4Q7Z7H5 227 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 PLEKHA2Q9HB19 425 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 RNF114Q9Y508 228 aa17.52■□□□□ 0.4
SHMT1-203ENST00000354098 NDUFB6O95139 128 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 HLA-DRB1P01911 266 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 RPA2P15927 270 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 AKR1C4P17516 323 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 MRGPRG-AS1Q2M3A8 158 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 VMA21Q3ZAQ7 101 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 PPP1R27Q86WC6 154 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 TCTEX1D1Q8N7M0 179 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 RHOVQ96L33 236 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 NAA60Q9H7X0 242 aa17.52■□□□□ 0.39
SHMT1-203ENST00000354098 IGHV7-81A0A0B4J1V7 117 aa17.51■□□□□ 0.39
SHMT1-203ENST00000354098 TEX13DA0A0J9YY54 714 aaPredicted RBP17.51■□□□□ 0.39
SHMT1-203ENST00000354098 CRYM-AS1A6NIL9 109 aa17.51■□□□□ 0.39
SHMT1-203ENST00000354098 H0Y980 276 aa17.51■□□□□ 0.39
SHMT1-203ENST00000354098 HRASP01112 189 aa17.51■□□□□ 0.39
SHMT1-203ENST00000354098 VDAC2P45880 294 aaPredicted RBP17.51■□□□□ 0.39
SHMT1-203ENST00000354098 SLC35E3Q7Z769 313 aa17.51■□□□□ 0.39
SHMT1-203ENST00000354098 LINC00527Q9UJ94 153 aa17.51■□□□□ 0.39
SHMT1-203ENST00000354098 FLVCR2Q9UPI3 526 aa17.51■□□□□ 0.39
SHMT1-203ENST00000354098 MMP24Q9Y5R2 645 aa17.51■□□□□ 0.39
SHMT1-203ENST00000354098 HAX1O00165 279 aa17.5■□□□□ 0.39
SHMT1-203ENST00000354098 IGKV1-39P01597 117 aa17.5■□□□□ 0.39
SHMT1-203ENST00000354098 IGKV1D-39P04432 117 aa17.5■□□□□ 0.39
SHMT1-203ENST00000354098 TAS2R31P59538 309 aa17.5■□□□□ 0.39
SHMT1-203ENST00000354098 ASAH1Q13510 395 aa17.5■□□□□ 0.39
SHMT1-203ENST00000354098 TEX45Q8NA69 505 aa17.5■□□□□ 0.39
SHMT1-203ENST00000354098 R3HDM4Q96D70 268 aa17.5■□□□□ 0.39
SHMT1-203ENST00000354098 NOL4LQ96MY1 436 aaPredicted RBP17.5■□□□□ 0.39
SHMT1-203ENST00000354098 TSC22D3Q99576 134 aa17.5■□□□□ 0.39
SHMT1-203ENST00000354098 CA2P00918 260 aa17.49■□□□□ 0.39
SHMT1-203ENST00000354098 OR5AC1P0C628 307 aa17.49■□□□□ 0.39
SHMT1-203ENST00000354098 NQO2P16083 231 aa17.49■□□□□ 0.39
SHMT1-203ENST00000354098 COMPP49747 757 aaPredicted RBP17.49■□□□□ 0.39
SHMT1-203ENST00000354098 PROK1P58294 105 aa17.49■□□□□ 0.39
SHMT1-203ENST00000354098 CX3CL1P78423 397 aa17.49■□□□□ 0.39
SHMT1-203ENST00000354098 PUSL1Q8N0Z8 303 aaKnown RBP17.49■□□□□ 0.39
SHMT1-203ENST00000354098 FAM212BQ9NTI7 297 aaPredicted RBP17.49■□□□□ 0.39
SHMT1-203ENST00000354098 OR2A4O95047 310 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 KRASP01116 189 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 SERPINE2P07093 398 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 SLC6A1P30531 599 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 G6PCP35575 357 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 SUPT4H1P63272 117 aaKnown RBP17.48■□□□□ 0.39
SHMT1-203ENST00000354098 SSBP2P81877 361 aaPredicted RBP17.48■□□□□ 0.39
SHMT1-203ENST00000354098 NDPQ00604 133 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 OR4A47Q6IF82 309 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 OR2A7Q96R45 310 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 COMMD9Q9P000 198 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 TENM1Q9UKZ4 2725 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 A0A1B0GUS0 222 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 POU2AF1Q16633 256 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 PRSS8Q16651 343 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 SGPP2Q8IWX5 399 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 DMBX1Q8NFW5 382 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 GLYATL2Q8WU03 294 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 OR51J1Q9H342 316 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 ZNF430Q9H8G1 570 aaPredicted RBP17.48■□□□□ 0.39
SHMT1-203ENST00000354098 PRR13Q9NZ81 148 aa17.48■□□□□ 0.39
SHMT1-203ENST00000354098 MARCH11A6NNE9 402 aa17.47■□□□□ 0.39
SHMT1-203ENST00000354098 UCP1P25874 307 aa17.47■□□□□ 0.39
SHMT1-203ENST00000354098 GNB1P62873 340 aa17.47■□□□□ 0.39
SHMT1-203ENST00000354098 ZNF562Q6V9R5 426 aa17.47■□□□□ 0.39
SHMT1-203ENST00000354098 CENPSQ8N2Z9 138 aa17.47■□□□□ 0.39
SHMT1-203ENST00000354098 WNT10AQ9GZT5 417 aa17.47■□□□□ 0.39
SHMT1-203ENST00000354098 TMEM222Q9H0R3 208 aa17.47■□□□□ 0.39
SHMT1-203ENST00000354098 FBXO7Q9Y3I1 522 aa17.47■□□□□ 0.39
SHMT1-203ENST00000354098 TRAV3A0A0B4J244 114 aa17.46■□□□□ 0.39
SHMT1-203ENST00000354098 ARPC1BO15143 372 aaKnown RBP17.46■□□□□ 0.39
SHMT1-203ENST00000354098 ATP6V0E1O15342 81 aa17.46■□□□□ 0.39
SHMT1-203ENST00000354098 KCNAB3O43448 404 aa17.46■□□□□ 0.39
SHMT1-203ENST00000354098 KBTBD11O94819 623 aa17.46■□□□□ 0.39
SHMT1-203ENST00000354098 KRTAP10-3P60369 221 aa17.46■□□□□ 0.39
SHMT1-203ENST00000354098 TRIM16LQ309B1 348 aa17.46■□□□□ 0.39
SHMT1-203ENST00000354098 MZT2BQ6NZ67 158 aa17.46■□□□□ 0.39
SHMT1-203ENST00000354098 KLHDC1Q8N7A1 406 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms