RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 AGMATQ9BSE5 352 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 PARD6GQ9BYG4 376 aaPredicted RBP7.16□□□□□ -1.26
TRIM55-204ENST00000353317 OR51I2Q9H344 312 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 LIN7CQ9NUP9 197 aaKnown RBP7.16□□□□□ -1.26
TRIM55-204ENST00000353317 GAB2Q9UQC2 676 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 MPC1Q9Y5U8 109 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 DSCAMO60469 2012 aa7.16□□□□□ -1.26
TRIM55-204ENST00000353317 USP9XQ93008 2570 aaPredicted RBP7.16□□□□□ -1.26
TRIM55-204ENST00000353317 SIRPB1O00241 398 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 KBTBD11O94819 623 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 OR2H2O95918 312 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 IFNA1P01562 189 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 AMBPP02760 352 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 GZMBP10144 247 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 RBPJQ06330 500 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 PMS2P11Q13670 270 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 JOSD1Q15040 202 aaPredicted RBP7.15□□□□□ -1.26
TRIM55-204ENST00000353317 CLEC12BQ2HXU8 276 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 BSXQ3C1V8 233 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 VHLLQ6RSH7 139 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 TMEM14EPQ6UXP3 125 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 ZNF497Q6ZNH5 498 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 ZNF826PQ6ZT77 177 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 SSX9Q7RTT3 188 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 REC114Q7Z4M0 266 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 DRAM1Q8N682 238 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 OR5R1Q8NH85 324 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 GATAD1Q8WUU5 269 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 SLC25A22Q9H936 323 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 TRAPPC2LQ9UL33 140 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 LAMP3Q9UQV4 416 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 J3QW42 95 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 RAMP3O60896 148 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 CLDN1O95832 211 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 TFF1P04155 84 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 RNF224P0DH78 156 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 PAX1P15863 534 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 TUBG1P23258 451 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 CD40P25942 277 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 CEACAM6P40199 344 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 WFDC8Q8IUA0 241 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 ELOVL1Q9BW60 279 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 PKIBQ9C010 78 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 PARLQ9H300 379 aa7.15□□□□□ -1.26
TRIM55-204ENST00000353317 RALYQ9UKM9 306 aaKnown RBP7.15□□□□□ -1.26
TRIM55-204ENST00000353317 ASH1LQ9NR48 2969 aaKnown RBP7.15□□□□□ -1.27
TRIM55-204ENST00000353317 CDIPTO14735 213 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 GALR1P47211 349 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 TNFRSF9Q07011 255 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 CENPVQ7Z7K6 275 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-204ENST00000353317 SCCPDHQ8NBX0 429 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 OR1P1Q8NH06 330 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 RNASEH2CQ8TDP1 164 aaKnown RBP7.14□□□□□ -1.27
TRIM55-204ENST00000353317 ELOVL5Q9NYP7 299 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 DUSP13Q9UII6 198 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 AKAP6Q13023 2319 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 FAM90A27PA6NNH2 459 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 FAM90A26D6RGX4 464 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 PPP5D1E7EU14 171 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 TMEM250H0YL14 139 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 J3QT63 122 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 DVL1O14640 695 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 KRASP01116 189 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 DEFA4P12838 97 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 KITLGP21583 273 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 PSMB3P49720 205 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 PRAMEF6Q5VXH4 476 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 MBNL2Q5VZF2 373 aaKnown RBP7.14□□□□□ -1.27
TRIM55-204ENST00000353317 FAM53AQ6NSI3 398 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF66Q6ZN08 573 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 LINC01560Q8TB33 94 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 NEUROG1Q92886 237 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 PCGF1Q9BSM1 259 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 MBNL3Q9NUK0 354 aaKnown RBP7.14□□□□□ -1.27
TRIM55-204ENST00000353317 TIMM9Q9Y5J7 89 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 A0A1W2PPQ1 181 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 XKRY2A2RUG3 117 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 H7BYZ3 331 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 SIAH2O43255 324 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 CRYAAP02489 173 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 GRPP07492 148 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 G6PCP35575 357 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 BSPH1Q075Z2 132 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 PRSS8Q16651 343 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
TRIM55-204ENST00000353317 MOB1BQ7L9L4 216 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 TGIF2LYQ8IUE0 185 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF664Q8N3J9 261 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 OR10G9Q8NGN4 311 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 OR10G7Q8NGN6 311 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 OR4F5Q8NH21 305 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 OR4F4Q96R69 305 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 MRPL37Q9BZE1 423 aaKnown RBP7.14□□□□□ -1.27
TRIM55-204ENST00000353317 CLN8Q9UBY8 286 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 HSPB7Q9UBY9 170 aa7.14□□□□□ -1.27
TRIM55-204ENST00000353317 DYSFO75923 2080 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF462Q96JM2 2506 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 CRYBG3Q68DQ2 2970 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 CTXND1A0A1B0GTU2 59 aa7.13□□□□□ -1.27
TRIM55-204ENST00000353317 TMEM8BA6NDV4 472 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms