RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 FAM157CP0CG43 387 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 GLRX5Q86SX6 157 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 OR4C13Q8NGP0 309 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 PROK2Q9HC23 129 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 C17orf98A8MV24 154 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 BMI1P35226 326 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 TMEM241Q24JQ0 296 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 DTX1Q86Y01 620 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 PHYHIPLQ96FC7 376 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 FBXL15Q9H469 300 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 DENND4CQ5VZ89 1909 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 DUXBA0A1W2PPF3 345 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 C5orf24Q7Z6I8 188 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 PIP4P1Q86T03 277 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 MRPL30Q8TCC3 161 aaKnown RBP11.54□□□□□ -0.56
SMC6-201ENST00000351948 LURAP1Q96LR2 239 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 TCF19Q9Y242 345 aa11.54□□□□□ -0.56
SMC6-201ENST00000351948 TMEM187Q14656 261 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 NEU4Q8WWR8 484 aaPredicted RBP11.53□□□□□ -0.56
SMC6-201ENST00000351948 BTF3L4Q96K17 158 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 PLXND1Q9Y4D7 1925 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 H3BTX0 84 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 CDK2AP1O14519 115 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 MIC13Q5XKP0 118 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 OR11H4Q8NGC9 324 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
SMC6-201ENST00000351948 IGKV1-27A0A075B6S5 117 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 TRAV24A0A0B4J272 114 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 KBTBD11-OT1A0A1B0GTJ5 212 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 TNFRSF9Q07011 255 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 TMEM186Q96B77 213 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 NPVFQ9HCQ7 196 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 CBLN4Q9NTU7 201 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 SLC25A15Q9Y619 301 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 SH2D7A6NKC9 451 aaPredicted RBP11.53□□□□□ -0.56
SMC6-201ENST00000351948 MPTX1A8MV57 137 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 C16orf82Q7Z2V1 217 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 PXMP4Q9Y6I8 212 aa11.53□□□□□ -0.56
SMC6-201ENST00000351948 IGKV1D-8A0A087WSZ0 117 aa11.52□□□□□ -0.56
SMC6-201ENST00000351948 LINC00869P0C866 280 aa11.52□□□□□ -0.56
SMC6-201ENST00000351948 CAMPP49913 170 aa11.52□□□□□ -0.56
SMC6-201ENST00000351948 PPOXP50336 477 aa11.52□□□□□ -0.56
SMC6-201ENST00000351948 HSPE1P61604 102 aaKnown RBP11.52□□□□□ -0.56
SMC6-201ENST00000351948 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.56
SMC6-201ENST00000351948 A0A0A6YYD4 124 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 IGHV3-23P01764 117 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 FXYD3Q14802 87 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 DHRS7BQ6IAN0 325 aaPredicted RBP11.52□□□□□ -0.57
SMC6-201ENST00000351948 OR4C12Q96R67 309 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 PLXNA2O75051 1894 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 IGKV1D-13A0A0B4J2D9 117 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 SLC31A2O15432 143 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 IGHG3P01860 377 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 IGKV1-13P0DP09 117 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 CCL1P22362 96 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 DYNLRB2Q8TF09 96 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 CHRDL1Q9BU40 450 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 PNRC2Q9NPJ4 139 aaKnown RBP11.52□□□□□ -0.57
SMC6-201ENST00000351948 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 CGB1A6NKQ9 187 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 KBTBD11O94819 623 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 FHL1Q13642 323 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 FAM24BQ8N5W8 94 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 TMEM37Q8WXS4 190 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 SLC25A28Q96A46 364 aa11.52□□□□□ -0.57
SMC6-201ENST00000351948 TMSB15BA0A087X1C1 80 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 IGKV1D-33P01593 117 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 IGKV1-33P01594 117 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 SLC35E3Q7Z769 313 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 RTN4RL2Q86UN3 420 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 COMMD1Q8N668 190 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 MRPL20Q9BYC9 149 aaKnown RBP11.51□□□□□ -0.57
SMC6-201ENST00000351948 NUP210Q8TEM1 1887 aaPredicted RBP11.51□□□□□ -0.57
SMC6-201ENST00000351948 SIGLEC5O15389 551 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
SMC6-201ENST00000351948 HGFACQ04756 655 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 PCSK4Q6UW60 755 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 RAB19A4D1S5 217 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
SMC6-201ENST00000351948 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
SMC6-201ENST00000351948 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
SMC6-201ENST00000351948 HSPB1P04792 205 aaKnown RBP11.51□□□□□ -0.57
SMC6-201ENST00000351948 C2orf68Q2NKX9 166 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 WDFY1Q8IWB7 410 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 OR4A5Q8NH83 315 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
SMC6-201ENST00000351948 ISOC2Q96AB3 205 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 DPM3Q9P2X0 92 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 COL4A3Q01955 1670 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 F5H697 171 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 K7EM74 188 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 OR2J3O76001 311 aa11.51□□□□□ -0.57
SMC6-201ENST00000351948 THBDP07204 575 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 ZNF250P15622 560 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 ZNF581Q9P0T4 197 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 PITX3O75364 302 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 HYPMO75409 117 aa11.5□□□□□ -0.57
SMC6-201ENST00000351948 RNF24Q9Y225 148 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms