RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SSMEM1Q8WWF3 244 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 MRPS16Q9Y3D3 137 aaKnown RBP12.86□□□□□ -0.35
LMNA-201ENST00000347559 DOCK7Q96N67 2140 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 A0A1W2PRS3 328 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 GLB1P16278 677 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 CEACAM21Q3KPI0 293 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 YRDCQ86U90 279 aaKnown RBP12.86□□□□□ -0.35
LMNA-201ENST00000347559 SFXN3Q9BWM7 321 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
LMNA-201ENST00000347559 CST9LQ9H4G1 147 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 RPL30P62888 115 aaKnown RBP12.85□□□□□ -0.35
LMNA-201ENST00000347559 IFI44Q8TCB0 444 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 CPT1CQ8TCG5 803 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 GNB1LQ9BYB4 327 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 SERTAD4Q9NUC0 356 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 CD207Q9UJ71 328 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 IGHV2-26A0A0B4J1V2 119 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 ZIC3O60481 467 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 RHBDL1O75783 438 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 PCBD1P61457 104 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 OCIAD2Q56VL3 154 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 H2BFWTQ7Z2G1 175 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 GCNT2Q8N0V5 402 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 TSKUQ8WUA8 353 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 OR2D2Q9H210 308 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 MMP17Q9ULZ9 603 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 URB1O60287 2271 aaKnown RBP12.85□□□□□ -0.35
LMNA-201ENST00000347559 FREM1Q5H8C1 2179 aa12.85□□□□□ -0.35
LMNA-201ENST00000347559 IGHV1-69-2A0A0G2JMI3 117 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 A0A1W2PN81 502 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 CXCL13O43927 109 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 OR4A47Q6IF82 309 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 VASH2Q86V25 355 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.84□□□□□ -0.35
LMNA-201ENST00000347559 DUSP3P51452 185 aaPredicted RBP12.84□□□□□ -0.35
LMNA-201ENST00000347559 ASPHD1Q5U4P2 390 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 EAF1Q96JC9 268 aaPredicted RBP12.84□□□□□ -0.35
LMNA-201ENST00000347559 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 IGLC7A0M8Q6 106 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 C17orf98A8MV24 154 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 MMP23AO75900 390 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 NGFP01138 241 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 IGLL1P15814 213 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 MORN2Q502X0 79 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 C1QTNF5Q9BXJ0 243 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 AKIRIN1Q9H9L7 192 aaPredicted RBP12.84□□□□□ -0.35
LMNA-201ENST00000347559 V9GYV3 84 aa12.84□□□□□ -0.35
LMNA-201ENST00000347559 TRAV9-1A0A075B6T8 112 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 RNF212BA8MTL3 300 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 BMPR1BO00238 502 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 PPBPP02775 128 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 TRIP6Q15654 476 aaKnown RBP12.83□□□□□ -0.36
LMNA-201ENST00000347559 MPV17L2Q567V2 206 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 OR10J3Q5JRS4 329 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 PRR31Q5SQ13 230 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 TMEM136Q6ZRR5 245 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 Q8N7P7 452 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 KCNE4Q8WWG9 221 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 ZPBPQ9BS86 351 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 WASHC3Q9Y3C0 194 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 LMO7DNF2Z398 122 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 CXorf1O96002 111 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 GABRA2P47869 451 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 SPATA31B1PQ5VZV4 182 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 WDR83OSQ9Y284 106 aa12.83□□□□□ -0.36
LMNA-201ENST00000347559 HSBP1O75506 76 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 BRWD1Q9NSI6 2320 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 OR2T8A6NH00 312 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 ZNF891A8MT65 544 aaPredicted RBP12.82□□□□□ -0.36
LMNA-201ENST00000347559 SCRG1O75711 98 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 LIFP15018 202 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 TMEM11P17152 192 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 DCAF12Q5T6F0 453 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 WDR73Q6P4I2 378 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 ZNF439Q8NDP4 499 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 SPSB4Q96A44 273 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 SELENOKQ9Y6D0 94 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 TRBV9A0A0B4J1U6 114 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 C15orf62A8K5M9 175 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 FOXH1O75593 365 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 STAG3L2P0CL84 134 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 STAG3L3P0CL85 134 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 MGST1P10620 155 aaKnown RBP12.82□□□□□ -0.36
LMNA-201ENST00000347559 DSCR4P56555 118 aaPredicted RBP12.82□□□□□ -0.36
LMNA-201ENST00000347559 KRTAP27-1Q3LI81 207 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 BCL2L2Q92843 193 aaPredicted RBP12.82□□□□□ -0.36
LMNA-201ENST00000347559 CLEC1BQ9P126 229 aa12.82□□□□□ -0.36
LMNA-201ENST00000347559 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
LMNA-201ENST00000347559 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
LMNA-201ENST00000347559 GNG4P50150 75 aa12.81□□□□□ -0.36
LMNA-201ENST00000347559 CENPWQ5EE01 88 aa12.81□□□□□ -0.36
LMNA-201ENST00000347559 C19orf35Q6ZS72 473 aa12.81□□□□□ -0.36
LMNA-201ENST00000347559 C17orf82Q86X59 251 aaPredicted RBP12.81□□□□□ -0.36
LMNA-201ENST00000347559 OR4F17Q8NGA8 305 aa12.81□□□□□ -0.36
LMNA-201ENST00000347559 OR5B21A6NL26 309 aa12.81□□□□□ -0.36
LMNA-201ENST00000347559 M0R2Z0 102 aa12.81□□□□□ -0.36
LMNA-201ENST00000347559 MT-ND6P03923 174 aa12.81□□□□□ -0.36
LMNA-201ENST00000347559 RAC2P15153 192 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms