RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 G6PCP35575 357 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 HINT1P49773 126 aaPredicted RBP13.1□□□□□ -0.31
LRP8-202ENST00000347547 HTD2P86397 168 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 EIF4EBP1Q13541 118 aaPredicted RBP13.1□□□□□ -0.31
LRP8-202ENST00000347547 Q6P435 159 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 ZNF497Q6ZNH5 498 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 TMEM136Q6ZRR5 245 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 SMIM15Q7Z3B0 74 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 GCNT2Q8N0V5 402 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 PROK2Q9HC23 129 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 TNRC6AQ8NDV7 1962 aaKnown RBP13.1□□□□□ -0.31
LRP8-202ENST00000347547 C15orf62A8K5M9 175 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 SS18L1O75177 396 aaPredicted RBP13.1□□□□□ -0.31
LRP8-202ENST00000347547 FRMD6-AS1P0C7T7 363 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 BPIFB3P59826 476 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 RHOGP84095 191 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 MRPL21Q7Z2W9 205 aaKnown RBP13.1□□□□□ -0.31
LRP8-202ENST00000347547 ZNF645Q8N7E2 425 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 TSTD1Q8NFU3 115 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 OR4P4Q8NGL7 312 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 EAF1Q96JC9 268 aaPredicted RBP13.1□□□□□ -0.31
LRP8-202ENST00000347547 MRPL27Q9P0M9 148 aaKnown RBP13.1□□□□□ -0.31
LRP8-202ENST00000347547 NAT8BQ9UHF3 227 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 KIAA1549Q9HCM3 1950 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 ABCA7Q8IZY2 2146 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 SDK1Q7Z5N4 2213 aa13.1□□□□□ -0.31
LRP8-202ENST00000347547 MED12Q93074 2177 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 RAMP3O60896 148 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 CLDN14O95500 239 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 CA2P00918 260 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 PMCHP20382 165 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 RCHY1Q96PM5 261 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 MBNL3Q9NUK0 354 aaKnown RBP13.09□□□□□ -0.31
LRP8-202ENST00000347547 CYC1P08574 325 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 GFRA1P56159 465 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 EDDM3BP56851 147 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 RPL31P62899 125 aaKnown RBP13.09□□□□□ -0.31
LRP8-202ENST00000347547 STUMQ69YW2 141 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 ETFRF1Q6IPR1 90 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 TIPARPQ7Z3E1 657 aaKnown RBP13.09□□□□□ -0.31
LRP8-202ENST00000347547 MUC15Q8N387 334 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 ZNF488Q96MN9 340 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 PKIBQ9C010 78 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 NCOR1P1Q9H4R4 102 aa13.09□□□□□ -0.31
LRP8-202ENST00000347547 YTHDF2Q9Y5A9 579 aaKnown RBP13.09□□□□□ -0.31
LRP8-202ENST00000347547 CDIPTO14735 213 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 GLB1P16278 677 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 OR4F17Q8NGA8 305 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 TRAV34A0A0B4J273 112 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 OR5B21A6NL26 309 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 CCL3P10147 92 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 AREGP15514 252 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 Q6ZVH6 145 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 HES4Q9HCC6 221 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 SH2D2AQ9NP31 389 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 PRDM6Q9NQX0 595 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 KCNIP1Q9NZI2 227 aa13.08□□□□□ -0.32
LRP8-202ENST00000347547 TRAV9-2A0A087WT02 112 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 SIRPB1O00241 398 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 RRHO14718 337 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 HLA-DQA1P01909 254 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 B3GALT5-AS1P59052 145 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 CATR1Q13166 79 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 HLA-BQ31612 363 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 TSKUQ8WUA8 353 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 FAM122AQ96E09 287 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 WNT10AQ9GZT5 417 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 TRAPPC2LQ9UL33 140 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 BMPR1BO00238 502 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 GCHFRP30047 84 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 CARD18P57730 90 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 RPS16P62249 146 aaKnown RBP13.07□□□□□ -0.32
LRP8-202ENST00000347547 RPL30P62888 115 aaKnown RBP13.07□□□□□ -0.32
LRP8-202ENST00000347547 GNG3P63215 75 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 BORCS7Q96B45 105 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 MRPS17Q9Y2R5 130 aaKnown RBP13.07□□□□□ -0.32
LRP8-202ENST00000347547 ARL2-SNX15V9GYD0 113 aa13.07□□□□□ -0.32
LRP8-202ENST00000347547 ARHGAP21Q5T5U3 1957 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 AMY1AP04745 511 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 TMPRSS3P57727 454 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 ARG2P78540 354 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 ZNF816Q0VGE8 651 aaPredicted RBP13.06□□□□□ -0.32
LRP8-202ENST00000347547 RNF151Q2KHN1 245 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 LRRC10Q5BKY1 277 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 SPATA46Q5T0L3 261 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 GGNQ86UU5 652 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 VASH2Q86V25 355 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 WDR31Q8NA23 367 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 OSTCQ9NRP0 149 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 MPC1Q9Y5U8 109 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 G3V3Y1 287 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 GDF9O60383 454 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 NEURL1O76050 574 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 CLDN18P56856 261 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 BRWD1-AS2P59051 145 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 SELENOVP59797 346 aa13.06□□□□□ -0.32
LRP8-202ENST00000347547 H2BFWTQ7Z2G1 175 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms