RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MGST3O14880 152 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 SLC25A17O43808 307 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 GZMHP20718 246 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 FABP9Q0Z7S8 132 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 RAB39BQ96DA2 213 aa11.1□□□□□ -0.63
CASC4-202ENST00000345795 ZNF705GA8MUZ8 300 aaPredicted RBP11.09□□□□□ -0.63
CASC4-202ENST00000345795 FAM157CP0CG43 387 aa11.09□□□□□ -0.63
CASC4-202ENST00000345795 LRRC10Q5BKY1 277 aa11.09□□□□□ -0.63
CASC4-202ENST00000345795 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
CASC4-202ENST00000345795 APOA2P02652 100 aa11.09□□□□□ -0.63
CASC4-202ENST00000345795 FAM78BQ5VT40 261 aa11.09□□□□□ -0.63
CASC4-202ENST00000345795 SAT2Q96F10 170 aaPredicted RBP11.09□□□□□ -0.63
CASC4-202ENST00000345795 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
CASC4-202ENST00000345795 OR6C3Q9NZP0 311 aa11.09□□□□□ -0.63
CASC4-202ENST00000345795 A0A1B0GU03 582 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 DNASE2O00115 360 aaPredicted RBP11.08□□□□□ -0.63
CASC4-202ENST00000345795 IGKV1-39P01597 117 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 IGKV1D-39P04432 117 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 CD3EP07766 207 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 SEC11BP0C7V7 166 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 DANCRP0C864 163 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 COX5AP20674 150 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 TIMM23BQ5SRD1 257 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 SEM1Q6ZVN7 128 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 OR4P4Q8NGL7 312 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 C12orf57Q99622 126 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.63
CASC4-202ENST00000345795 UBTD1Q9HAC8 227 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 SLC25A15Q9Y619 301 aa11.08□□□□□ -0.63
CASC4-202ENST00000345795 PPIAL4EA0A075B759 164 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 PPIAL4DF5H284 164 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 CDK2AP1O14519 115 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 IGHV1-46P01743 117 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 HBE1P02100 147 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 OR9G9P0C7N8 305 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 PPIAL4FP0DN26 164 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 GLRXP35754 106 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 RAB31Q13636 194 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 TNXAQ16473 311 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 C19orf35Q6ZS72 473 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 OR10W1Q8NGF6 305 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 ZNF251Q9BRH9 671 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 PARP11Q9NR21 331 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 PPIAL4AQ9Y536 164 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 TMEM210A6NLX4 147 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 FOXI3A8MTJ6 420 aaPredicted RBP11.08□□□□□ -0.64
CASC4-202ENST00000345795 HLA-GP17693 338 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 CDKN1AP38936 164 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 PIP4P1Q86T03 277 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 PCGF1Q9BSM1 259 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 TUBD1Q9UJT1 453 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 HIVEP2P31629 2446 aa11.08□□□□□ -0.64
CASC4-202ENST00000345795 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.07□□□□□ -0.64
CASC4-202ENST00000345795 J3QR06 171 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 GAMTQ14353 236 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 RTL8BQ17RB0 113 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 LYPD2Q6UXB3 125 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 OR4D5Q8NGN0 318 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 FAM103A1Q9BTL3 118 aaKnown RBP11.07□□□□□ -0.64
CASC4-202ENST00000345795 A8MXE2 369 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 TAS2R30P59541 319 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 ZNF585BQ52M93 769 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 OR10A7Q8NGE5 316 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 TAF15Q92804 592 aaKnown RBP eCLIP11.07□□□□□ -0.64
CASC4-202ENST00000345795 RCC1LQ96I51 464 aaKnown RBP11.07□□□□□ -0.64
CASC4-202ENST00000345795 EAF1Q96JC9 268 aaPredicted RBP11.07□□□□□ -0.64
CASC4-202ENST00000345795 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 hADV38S2A0JD32 116 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 H7BYZ3 331 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 CFPP27918 469 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 CDC34P49427 236 aaPredicted RBP11.07□□□□□ -0.64
CASC4-202ENST00000345795 FAM3BP58499 235 aaPredicted RBP11.07□□□□□ -0.64
CASC4-202ENST00000345795 RAB24Q969Q5 203 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 SEC11CQ9BY50 192 aa11.07□□□□□ -0.64
CASC4-202ENST00000345795 UNKLQ9H9P5 680 aaKnown RBP11.07□□□□□ -0.64
CASC4-202ENST00000345795 SAA2-SAA4A0A096LPE2 208 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 DPRXA6NFQ7 191 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 RRHO14718 337 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 PITX3O75364 302 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 SAA2P0DJI9 122 aaPredicted RBP11.06□□□□□ -0.64
CASC4-202ENST00000345795 ACTR3CQ9C0K3 210 aaPredicted RBP11.06□□□□□ -0.64
CASC4-202ENST00000345795 IGKV3-15P01624 115 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 IGKV1-16P04430 117 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 UCP3P55916 312 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 MST1LQ2TV78 715 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 NRN1LQ496H8 165 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 SPNS3Q6ZMD2 512 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 SAXO1Q8IYX7 474 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 C22orf15Q8WYQ4 148 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 SNX22Q96L94 193 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 PLSCR4Q9NRQ2 329 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 CPAMD8Q8IZJ3 1885 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 RBMS3Q6XE24 437 aaKnown RBP11.06□□□□□ -0.64
CASC4-202ENST00000345795 FAM57AQ8TBR7 257 aa11.06□□□□□ -0.64
CASC4-202ENST00000345795 C17orf112F2Z3M2 114 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 CD1BP29016 333 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 ZNF134P52741 427 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 DIAPH2-AS1Q14236 149 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 NMSQ5H8A3 153 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 UQCC3Q6UW78 93 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms