RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TRIM63Q969Q1 353 aa9.4□□□□□ -0.9
SNCA-202ENST00000345009 RITA1Q96K30 269 aa9.4□□□□□ -0.9
SNCA-202ENST00000345009 CCDC32Q9BV29 185 aa9.4□□□□□ -0.9
SNCA-202ENST00000345009 FXYD6Q9H0Q3 95 aa9.4□□□□□ -0.9
SNCA-202ENST00000345009 FAM212BQ9NTI7 297 aaPredicted RBP9.4□□□□□ -0.9
SNCA-202ENST00000345009 SLC2A8Q9NY64 477 aa9.4□□□□□ -0.9
SNCA-202ENST00000345009 METTL1Q9UBP6 276 aaKnown RBP9.4□□□□□ -0.9
SNCA-202ENST00000345009 TENM1Q9UKZ4 2725 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 AP4M1O00189 453 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 SLC25A17O43808 307 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 ACTL6BO94805 426 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 HPRT1P00492 218 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 IGHG2P01859 326 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 HLA-DRB1P01911 266 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 RLN1P04808 185 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 SERPINE2P07093 398 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 CTSDP07339 412 aaPredicted RBP9.39□□□□□ -0.91
SNCA-202ENST00000345009 ZNF735P0CB33 412 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 VSIG10L2P0DP72 767 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 F2RP25116 425 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 CD40LGP29965 261 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 PIGPP57054 158 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 UBE2KP61086 200 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 ERVK-16P61578 105 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 RPL30P62888 115 aaKnown RBP9.39□□□□□ -0.91
SNCA-202ENST00000345009 SLC35B1P78383 322 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 ZNF846Q147U1 533 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 OR2B11Q5JQS5 317 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 FAAP20Q6NZ36 180 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 TEX45Q8NA69 505 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 CHPT1Q8WUD6 406 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 TAF15Q92804 592 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNCA-202ENST00000345009 SLC25A21Q9BQT8 299 aaPredicted RBP9.39□□□□□ -0.91
SNCA-202ENST00000345009 C7orf50Q9BRJ6 194 aaKnown RBP9.39□□□□□ -0.91
SNCA-202ENST00000345009 FBXL15Q9H469 300 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 PLEKHA2Q9HB19 425 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 HRASLSQ9HDD0 168 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 AKIP1Q9NQ31 210 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 SLC2A9Q9NRM0 540 aa9.39□□□□□ -0.91
SNCA-202ENST00000345009 MPPED1O15442 326 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 ATG12O94817 140 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 CNIH1O95406 144 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 NQO2P16083 231 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 CNTFRP26992 372 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 TAS2R31P59538 309 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 RND3P61587 244 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 TMEM267Q0VDI3 215 aaPredicted RBP9.38□□□□□ -0.91
SNCA-202ENST00000345009 BAK1Q16611 211 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 FBLN7Q53RD9 439 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 ZNF562Q6V9R5 426 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 TBC1D26Q86UD7 250 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 OR13C8Q8NGS7 320 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 MARCH1Q8TCQ1 289 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 RHOVQ96L33 236 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 ZNF747Q9BV97 191 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 SERTAD4Q9NUC0 356 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 SIGLEC9Q9Y336 463 aa9.38□□□□□ -0.91
SNCA-202ENST00000345009 PIGBOS1A0A0B4J2F0 54 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 TEX13DA0A0J9YY54 714 aaPredicted RBP9.37□□□□□ -0.91
SNCA-202ENST00000345009 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
SNCA-202ENST00000345009 OR2A4O95047 310 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 IL7P13232 177 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 RPA2P15927 270 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 PROK1P58294 105 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 MMD2Q8IY49 270 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 COMMD1Q8N668 190 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 DMBX1Q8NFW5 382 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 OR4A5Q8NH83 315 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 ABHD5Q8WTS1 349 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 OR2A7Q96R45 310 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 GPHA2Q96T91 129 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 OR51J1Q9H342 316 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 COMMD9Q9P000 198 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 KCNIP3Q9Y2W7 256 aa9.37□□□□□ -0.91
SNCA-202ENST00000345009 C3orf85A0A1B0GTC6 90 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 LINC00854A0A1B0GVQ3 168 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 RAMP3O60896 148 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 IGLV2-23P01705 113 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 IGF1P05019 195 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 PI3P19957 117 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 VDAC1P21796 283 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 LPAR6P43657 344 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 CX3CL1P78423 397 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 RBMS2Q15434 407 aaKnown RBP9.36□□□□□ -0.91
SNCA-202ENST00000345009 Q6ZS46 218 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 SGPP2Q8IWX5 399 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 OR4X2Q8NGF9 303 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 WFDC12Q8WWY7 111 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 CLCC1Q96S66 551 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 WNT10AQ9GZT5 417 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 GPR132Q9UNW8 380 aa9.36□□□□□ -0.91
SNCA-202ENST00000345009 TNCP24821 2201 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 PSMB11A5LHX3 300 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 SRRM4A7MD48 611 aaKnown RBP9.35□□□□□ -0.91
SNCA-202ENST00000345009 H0Y980 276 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 CA2P00918 260 aa9.35□□□□□ -0.91
SNCA-202ENST00000345009 ANXA3P12429 323 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms