RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 SSBP2P81877 361 aaPredicted RBP9.53□□□□□ -0.88
SGCA-202ENST00000344627 NEDD8Q15843 81 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 CNIH2Q6PI25 160 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 KCTD9Q7L273 389 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 SGPP2Q8IWX5 399 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 OSR1Q8TAX0 266 aaPredicted RBP9.53□□□□□ -0.88
SGCA-202ENST00000344627 TCTEX1D2Q8WW35 142 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 DDB2Q92466 427 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 TINAGL1Q9GZM7 467 aaPredicted RBP9.53□□□□□ -0.88
SGCA-202ENST00000344627 RNF167Q9H6Y7 350 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 VCX3AQ9NNX9 186 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 SPATA2Q9UM82 520 aa9.53□□□□□ -0.88
SGCA-202ENST00000344627 MRPS7Q9Y2R9 242 aaKnown RBP9.53□□□□□ -0.88
SGCA-202ENST00000344627 DNAH7Q8WXX0 4024 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 H0Y980 276 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 CREBL2O60519 120 aaPredicted RBP9.52□□□□□ -0.89
SGCA-202ENST00000344627 SLC22A5O76082 557 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 FCER2P06734 321 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 OR9G9P0C7N8 305 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 FRMD6-AS1P0C7T7 363 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 SAA1P0DJI8 122 aaPredicted RBP9.52□□□□□ -0.89
SGCA-202ENST00000344627 SYNJ2BPP57105 145 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 TATDN3Q17R31 274 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
SGCA-202ENST00000344627 TM2D3Q9BRN9 247 aa9.52□□□□□ -0.89
SGCA-202ENST00000344627 PEF1Q9UBV8 284 aaKnown RBP9.52□□□□□ -0.89
SGCA-202ENST00000344627 RBMX2Q9Y388 322 aaKnown RBP9.52□□□□□ -0.89
SGCA-202ENST00000344627 IGKV1D-13A0A0B4J2D9 117 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 TRIM64CA6NLI5 447 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 SSX5O60225 188 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 HLA-DQB1P01920 261 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 PRH1P02810 166 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 IGKV1-13P0DP09 117 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 RPL30P62888 115 aaKnown RBP9.51□□□□□ -0.89
SGCA-202ENST00000344627 CDK10Q15131 360 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 RPEL1Q2QD12 228 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 MMD2Q8IY49 270 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 VKORC1L1Q8N0U8 176 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 OR5H6Q8NGV6 325 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 SECTM1Q8WVN6 248 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 ISOC1Q96CN7 298 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 USMG5Q96IX5 58 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 HSD17B10Q99714 261 aaKnown RBP9.51□□□□□ -0.89
SGCA-202ENST00000344627 SPIN2AQ99865 258 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 SPIN2BQ9BPZ2 258 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 ZNF430Q9H8G1 570 aaPredicted RBP9.51□□□□□ -0.89
SGCA-202ENST00000344627 DIABLOQ9NR28 239 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 TAS2R8Q9NYW2 309 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 SIGLEC8Q9NYZ4 499 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 ANXA10Q9UJ72 324 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 ETV7Q9Y603 341 aa9.51□□□□□ -0.89
SGCA-202ENST00000344627 DPPA5A6NC42 116 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 IGLV1-51P01701 117 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 TRBV12-3P01733 135 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 PTHLHP12272 177 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 RHOGP84095 191 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 ATP5G2Q06055 141 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 DYRK1AQ13627 763 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 KLF5Q13887 457 aaPredicted RBP9.5□□□□□ -0.89
SGCA-202ENST00000344627 MRGPRG-AS1Q2M3A8 158 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 FAM209BQ5JX69 171 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 ZNF343Q6P1L6 599 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 GVQW1Q8N7I0 195 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 ADAD2Q8NCV1 583 aaKnown RBP9.5□□□□□ -0.89
SGCA-202ENST00000344627 BEST4Q8NFU0 473 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 OR9G4Q8NGQ1 327 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 OR4S2Q8NH73 311 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 IL17DQ8TAD2 202 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 SNAPC3Q92966 411 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 GPHA2Q96T91 129 aa9.5□□□□□ -0.89
SGCA-202ENST00000344627 A0A087WXM4 84 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 TNFSF12O43508 249 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 OR2A4O95047 310 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 IFNA6P05013 189 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 FCGR2CP31995 323 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 FXYD4P59646 89 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
SGCA-202ENST00000344627 C10orf55Q5SWW7 151 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 SSX9Q7RTT3 188 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 SLC25A42Q86VD7 318 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 MFSD4AQ8N468 514 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 OR2K2Q8NGT1 345 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 FYTTD1Q96QD9 318 aaKnown RBP9.49□□□□□ -0.89
SGCA-202ENST00000344627 OR2A7Q96R45 310 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 AKIP1Q9NQ31 210 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 C19orf73Q9NVV2 129 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 ADAM30Q9UKF2 790 aa9.49□□□□□ -0.89
SGCA-202ENST00000344627 DYNC2H1Q8NCM8 4307 aaKnown RBP9.49□□□□□ -0.89
SGCA-202ENST00000344627 LCE6AA0A183 80 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 MEIS3P1A6NDR6 274 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 HMX3A6NHT5 357 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 FAM223BA6NKX1 122 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 RBMXL2O75526 392 aaKnown RBP9.48□□□□□ -0.89
SGCA-202ENST00000344627 OR2J3O76001 311 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 IGLV2-14P01704 120 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 IGHV4-30-4P0DP06 118 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 RPL27AP46776 148 aaKnown RBP9.48□□□□□ -0.89
SGCA-202ENST00000344627 SCAND1P57086 179 aa9.48□□□□□ -0.89
SGCA-202ENST00000344627 GTSCR1Q86UQ5 136 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms