RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 C7orf69Q9H7B7 122 aa10.25□□□□□ -0.77
CT55-202ENST00000344129 RCL1Q9Y2P8 373 aaKnown RBP10.25□□□□□ -0.77
CT55-202ENST00000344129 WASHC3Q9Y3C0 194 aa10.25□□□□□ -0.77
CT55-202ENST00000344129 AUP1Q9Y679 476 aa10.25□□□□□ -0.77
CT55-202ENST00000344129 ITPR2Q14571 2701 aa10.25□□□□□ -0.77
CT55-202ENST00000344129 TRAV3A0A0B4J244 114 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 CENPVL3A0A0U1RRI6 287 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 A0A1W2PPI3 338 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 SHOXO15266 292 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 PITX3O75364 302 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 IGHV4-31P0DP07 118 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 SLC25A4P12235 298 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 NKX2-1P43699 371 aaPredicted RBP10.24□□□□□ -0.77
CT55-202ENST00000344129 OR2B8PP59922 312 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 ERVK-16P61578 105 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 POLR2GP62487 172 aaKnown RBP eCLIP10.24□□□□□ -0.77
CT55-202ENST00000344129 SSX2Q16385 188 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 MIDNQ504T8 468 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 RITA1Q96K30 269 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 TMEM140Q9NV12 185 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 HSPB11Q9Y547 144 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 AKAP9Q99996 3911 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 CR1P17927 2039 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 TRAV20A0A0B4J274 112 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 TIMM23O14925 209 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 ST8SIA3O43173 380 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 RBMXL2O75526 392 aaKnown RBP10.24□□□□□ -0.77
CT55-202ENST00000344129 TGFAP01135 160 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 RRASP10301 218 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 SLC25A6P12236 298 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 CXCL2P19875 107 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 CEACAM3P40198 252 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 AP2S1P53680 142 aaPredicted RBP10.24□□□□□ -0.77
CT55-202ENST00000344129 RPS16P62249 146 aaKnown RBP10.24□□□□□ -0.77
CT55-202ENST00000344129 TMEM249Q2WGJ8 235 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 LGALSLQ3ZCW2 172 aaPredicted RBP10.24□□□□□ -0.77
CT55-202ENST00000344129 DHRS7BQ6IAN0 325 aaPredicted RBP10.24□□□□□ -0.77
CT55-202ENST00000344129 OR4A47Q6IF82 309 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 PRSS54Q6PEW0 395 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 ZNF546Q86UE3 836 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 PDPNQ86YL7 162 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 FLYWCH2Q96CP2 140 aaKnown RBP10.24□□□□□ -0.77
CT55-202ENST00000344129 RHOVQ96L33 236 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 HARBI1Q96MB7 349 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 POMT1Q9Y6A1 747 aa10.24□□□□□ -0.77
CT55-202ENST00000344129 PRRC2AP48634 2157 aaKnown RBP10.23□□□□□ -0.77
CT55-202ENST00000344129 TRAV40A0A0B4J280 105 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 NPFFO15130 113 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 TXNL1O43396 289 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 SSSCA1O60232 199 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 DEDDO75618 318 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 HRASP01112 189 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 CD24P25063 80 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 MC5RP33032 325 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 SAA4P35542 130 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 TMEM177Q53S58 311 aa10.23□□□□□ -0.77
CT55-202ENST00000344129 CIARTQ8N365 385 aaPredicted RBP10.23□□□□□ -0.77
CT55-202ENST00000344129 QTRT1Q9BXR0 403 aaKnown RBP10.23□□□□□ -0.77
CT55-202ENST00000344129 HMSDA8MTL9 139 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 SMAD7O15105 426 aaKnown RBP10.22□□□□□ -0.77
CT55-202ENST00000344129 AVPP01185 164 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 RLN2P04090 185 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 PET100P0DJ07 73 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 IGHV4-38-2P0DP08 117 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 RAB13P51153 203 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 ID3Q02535 119 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 SPINK9Q5DT21 86 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 MINOS1Q5TGZ0 78 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 BRD3OSQ6XYD6 125 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 OR4C13Q8NGP0 309 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 OR4A16Q8NH70 328 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 OSR1Q8TAX0 266 aaPredicted RBP10.22□□□□□ -0.77
CT55-202ENST00000344129 AJUBAQ96IF1 538 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 MS4A7Q9GZW8 240 aaPredicted RBP10.22□□□□□ -0.77
CT55-202ENST00000344129 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.22□□□□□ -0.77
CT55-202ENST00000344129 TNFSF18Q9UNG2 199 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 MINOS1-NBL1R4GNA1 71 aa10.22□□□□□ -0.77
CT55-202ENST00000344129 IGHV1-69DA0A0B4J2H0 117 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 L7N2F9 121 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 WRBO00258 174 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 IGHV1-69P01742 117 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 SAA1P0DJI8 122 aaPredicted RBP10.21□□□□□ -0.77
CT55-202ENST00000344129 IAPPP10997 89 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 LYL1P12980 280 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 MYOD1P15172 320 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 CNTFRP26992 372 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 RELBQ01201 579 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 FBLN7Q53RD9 439 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 TMEM65Q6PI78 240 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 CFHR4Q92496 578 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 FOXC2Q99958 501 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 MFFQ9GZY8 342 aa10.21□□□□□ -0.77
CT55-202ENST00000344129 TBL2Q9Y4P3 447 aaKnown RBP10.21□□□□□ -0.77
CT55-202ENST00000344129 MSGN1A6NI15 193 aa10.21□□□□□ -0.78
CT55-202ENST00000344129 RGS13O14921 159 aa10.21□□□□□ -0.78
CT55-202ENST00000344129 CHST1O43916 411 aa10.21□□□□□ -0.78
CT55-202ENST00000344129 TSC22D2O75157 780 aa10.21□□□□□ -0.78
CT55-202ENST00000344129 VENTXO95231 258 aa10.21□□□□□ -0.78
CT55-202ENST00000344129 IGLV2-23P01705 113 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms