RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 IGF2RP11717 2491 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 LHBP01229 141 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 GYPAP02724 150 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 CFHR2P36980 270 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 RAB24Q969Q5 203 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 CCL13Q99616 98 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 CTXND1A0A1B0GTU2 59 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 IGHV1-46P01743 117 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 CRYABP02511 175 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 MAS1LP35410 378 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 TIMP3P35625 211 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 SELENOVP59797 346 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 MEF2BQ02080 365 aaPredicted RBP12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 ADIRFQ15847 76 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 C17orf58Q2M2W7 97 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 FAM216BQ8N7L0 139 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 NANPQ8TBE9 248 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 SNRNP40Q96DI7 357 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 SMIM7Q9BQ49 75 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 SVEP1Q4LDE5 3571 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 IGLV3-9A0A075B6K5 115 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 AP4M1O00189 453 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 F2RL2O00254 374 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 IGHV2-5P01817 119 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 CENPVQ7Z7K6 275 aaPredicted RBP12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 OR4F5Q8NH21 305 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 OR4F4Q96R69 305 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 SFXN3Q9BWM7 321 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 SDF2L1Q9HCN8 221 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 TMEM140Q9NV12 185 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 RNF7Q9UBF6 113 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 METTL1Q9UBP6 276 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 ATRXP46100 2492 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 RRHO14718 337 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 CD40P25942 277 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 PSMB3P49720 205 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 RTP5Q14D33 572 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 LYG1Q8N1E2 194 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 ZCCHC24Q8N2G6 241 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 ABHD12Q8N2K0 398 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 PRSS33Q8NF86 280 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 P2RX4Q99571 388 aa12.3□□□□□ -0.44
VIPAS39-202ENST00000343765 SAA2-SAA4A0A096LPE2 208 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 TRAV38-1A0A0B4J264 116 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 A8MXE2 369 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 SAA2P0DJI9 122 aaPredicted RBP12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 CD1BP29016 333 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 GNB2P62879 340 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 CCL8P80075 99 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 FAM57AQ8TBR7 257 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 ZNRD1Q9P1U0 126 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 YIF1AO95070 293 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 MBP02144 154 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 CCKARP32238 428 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 WDR25Q64LD2 544 aaPredicted RBP12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 WFDC8Q8IUA0 241 aa12.29□□□□□ -0.44
VIPAS39-202ENST00000343765 CSMD1Q96PZ7 3565 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 DCHS2Q6V1P9 2916 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 TRGV10A0A0A0MS01 117 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 C17orf112F2Z3M2 114 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 PAGE4O60829 102 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 S100A9P06702 114 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 NDUFA6P56556 154 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 SPCS3P61009 180 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 PNRC1Q12796 327 aaPredicted RBP12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 VWC2Q2TAL6 325 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 CR1LQ2VPA4 569 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 SDSLQ96GA7 329 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 GFOD1Q9NXC2 390 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 KBTBD11-OT1A0A1B0GTJ5 212 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 B4DEV8 164 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 MMP23AO75900 390 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 TRGC2P03986 189 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 MYOD1P15172 320 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 MDKP21741 143 aaPredicted RBP12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 CEACAM8P31997 349 aaPredicted RBP12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 CDC34P49427 236 aaPredicted RBP12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 RELBQ01201 579 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 C1QL4Q86Z23 238 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 NECAP1Q8NC96 275 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 GAFA1Q96PS6 74 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 HINT2Q9BX68 163 aa12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 PATZ1Q9HBE1 687 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-202ENST00000343765 CXorf65A6NEN9 183 aa12.27□□□□□ -0.44
VIPAS39-202ENST00000343765 CLN5O75503 358 aa12.27□□□□□ -0.44
VIPAS39-202ENST00000343765 UBE2G2P60604 165 aa12.27□□□□□ -0.44
VIPAS39-202ENST00000343765 STUMQ69YW2 141 aa12.27□□□□□ -0.44
VIPAS39-202ENST00000343765 TCF23Q7RTU1 214 aa12.27□□□□□ -0.44
VIPAS39-202ENST00000343765 SPTBN4Q9H254 2564 aa12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 YLPM1P49750 1951 aaKnown RBP12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 CLDN34H7C241 214 aa12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 C1orf87Q8N0U7 546 aa12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 CISD2Q8N5K1 135 aaKnown RBP12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 OR4S2Q8NH73 311 aa12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 FAM210BQ96KR6 192 aa12.27□□□□□ -0.45
VIPAS39-202ENST00000343765 IL19Q9UHD0 177 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms