RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ATRXP46100 2492 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 CEBPZOSA8MTT3 80 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 YPEL1O60688 119 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 RBMXL2O75526 392 aaKnown RBP12.4□□□□□ -0.42
TPM3-208ENST00000341485 IGHV1-46P01743 117 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 UQCRFS1P47985 274 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 LOXL3P58215 753 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 TFF3Q07654 80 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 C4orf17Q53FE4 359 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 FAM201AQ5SY85 155 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 HEPN1Q6WQI6 88 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
TPM3-208ENST00000341485 OR10P1Q8NGE3 313 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 YPEL2Q96QA6 119 aa12.4□□□□□ -0.42
TPM3-208ENST00000341485 DSPP15924 2871 aaKnown RBP12.4□□□□□ -0.43
TPM3-208ENST00000341485 SHISA9B4DS77 424 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 M0R1X1 148 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 F2RL2O00254 374 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 FCGR3BO75015 233 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 FGF7P21781 194 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 ZNF134P52741 427 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 EDDM3BP56851 147 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 Q8TCH9 128 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 IL19Q9UHD0 177 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 HCFC1P51610 2035 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 DSCAMO60469 2012 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 IGHV3-7P01780 117 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 SELLP14151 372 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 OR2B8PP59922 312 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 TLE1Q04724 770 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 VWC2Q2TAL6 325 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 RPL39P5Q59GN2 51 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 UTF1Q5T230 341 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 DMRTC2Q8IXT2 367 aaPredicted RBP12.39□□□□□ -0.43
TPM3-208ENST00000341485 C12orf57Q99622 126 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 IFI27L2Q9H2X8 130 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 SLC39A9Q9NUM3 307 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 VAX2Q9UIW0 290 aa12.39□□□□□ -0.43
TPM3-208ENST00000341485 ZZEF1O43149 2961 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 C15orf62A8K5M9 175 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 UBE2CO00762 179 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 S100A6P06703 90 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 CGB3P0DN86 165 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 CGB7P0DN87 165 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 ZNF343Q6P1L6 599 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 LHX4Q969G2 390 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 DIRC2Q96SL1 478 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 FAM234AQ9H0X4 552 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 CALYQ9NYX4 217 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 COL6A6A6NMZ7 2263 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 E7EQL1 145 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 SLC31A2O15432 143 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 HPRT1P00492 218 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 GNB2P62879 340 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 PMS2P11Q13670 270 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 AARDQ4LEZ3 155 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 Q8WTZ3 238 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 FAM216AQ8WUB2 273 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 NEUROG1Q92886 237 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 P2RX4Q99571 388 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 SLC25A22Q9H936 323 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 OR6C3Q9NZP0 311 aa12.38□□□□□ -0.43
TPM3-208ENST00000341485 PCP4L1A6NKN8 68 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 IFNA1P01562 189 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 CXCL1P09341 107 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 MDKP21741 143 aaPredicted RBP12.37□□□□□ -0.43
TPM3-208ENST00000341485 GATA4P43694 442 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 ELOBQ15370 118 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 C17orf58Q2M2W7 97 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 FFAR4Q5NUL3 377 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 DUX4L9Q6RFH8 374 aaPredicted RBP12.37□□□□□ -0.43
TPM3-208ENST00000341485 C1orf229Q6ZS94 237 aaPredicted RBP12.37□□□□□ -0.43
TPM3-208ENST00000341485 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 C1QL4Q86Z23 238 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 FAM222BQ8WU58 562 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 NPCDR1Q9BY65 106 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 SIRT7Q9NRC8 400 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 DSCAML1Q8TD84 2053 aa12.37□□□□□ -0.43
TPM3-208ENST00000341485 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 HMGB3O15347 200 aaKnown RBP12.36□□□□□ -0.43
TPM3-208ENST00000341485 IGHV2-5P01817 119 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 MEOX2P50222 304 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 ERVFRD-1P60508 538 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 DYNLRB1Q9NP97 96 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 RAI1Q7Z5J4 1906 aaPredicted RBP12.36□□□□□ -0.43
TPM3-208ENST00000341485 CTXND1A0A1B0GTU2 59 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 FAM90A9PA6NNJ1 464 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 IFNA17P01571 189 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 APOBEC3AP31941 199 aaPredicted RBP12.36□□□□□ -0.43
TPM3-208ENST00000341485 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 LEAP2Q969E1 77 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 NCOR1P1Q9H4R4 102 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 SDF2L1Q9HCN8 221 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 GCM1Q9NP62 436 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 RNF7Q9UBF6 113 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 METTL1Q9UBP6 276 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms