RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CEACAM19Q7Z692 300 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 OR2AK2Q8NG84 335 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 CIRBP-AS1Q8TBR5 109 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 GNPDA2Q8TDQ7 276 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 SPSB1Q96BD6 273 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 YPEL2Q96QA6 119 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 RAB9BQ9NP90 201 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 CMC2Q9NRP2 79 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 PIPOXQ9P0Z9 390 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 IKZF2Q9UKS7 526 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 TRAPPC2LQ9UL33 140 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 ZNF257Q9Y2Q1 563 aa7.39□□□□□ -1.23
ATXN3-201ENST00000340660 TRBV7-1A0A0A6YYK4 115 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 SRRM4A7MD48 611 aaKnown RBP7.38□□□□□ -1.23
ATXN3-201ENST00000340660 K7EMT4 169 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 SNNO75324 88 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-201ENST00000340660 FAM98BQ52LJ0 330 aaKnown RBP7.38□□□□□ -1.23
ATXN3-201ENST00000340660 ACTL10Q5JWF8 245 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 LY6G6FQ5SQ64 297 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 C6orf183Q5T699 404 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 UTS2BQ765I0 119 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 PDPNQ86YL7 162 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 OR10K1Q8NGX5 313 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 OR10AC1Q8NH08 325 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 ABHD14BQ96IU4 210 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 APOL4Q9BPW4 351 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 CHAC1Q9BUX1 264 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 MS4A6AQ9H2W1 248 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 TAF9BQ9HBM6 251 aa7.38□□□□□ -1.23
ATXN3-201ENST00000340660 TRGV11A0A075B6L2 103 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 IGHV3OR16-12A0A075B7B8 117 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 HMX3A6NHT5 357 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 LINC00473A8K010 186 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 OR7C1O76099 320 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-201ENST00000340660 CRYGCP07315 174 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 PRSS8Q16651 343 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 SAMD4BQ5PRF9 694 aaKnown RBP7.37□□□□□ -1.23
ATXN3-201ENST00000340660 UBE2UQ5VVX9 321 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 BCDIN3DQ7Z5W3 292 aaKnown RBP7.37□□□□□ -1.23
ATXN3-201ENST00000340660 Q8N814 137 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 ZNF502Q8TBZ5 544 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 ZNF414Q96IQ9 312 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 DNAJC4Q9NNZ3 241 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 ARMC1Q9NVT9 282 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 FAM32AQ9Y421 112 aaKnown RBP7.37□□□□□ -1.23
ATXN3-201ENST00000340660 V9GYQ6 96 aa7.37□□□□□ -1.23
ATXN3-201ENST00000340660 TRAV3A0A0B4J244 114 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 IGHV7-4-1A0A0J9YVY3 117 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 FXYD1O00168 92 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 ANGPT2O15123 496 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 GNB3P16520 340 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 PAFAH1B2P68402 229 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 IRF3Q14653 427 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 EPGNQ6UW88 154 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 OR2T33Q8NG76 320 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 NEK7Q8TDX7 302 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 ACOT12Q8WYK0 555 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 C1QTNF4Q9BXJ3 329 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 YIPF3Q9GZM5 350 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 C11orf54Q9H0W9 315 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-201ENST00000340660 BAIAP2Q9UQB8 552 aa7.36□□□□□ -1.23
ATXN3-201ENST00000340660 IGHV3OR16-13A0A075B7E8 117 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 IGHV3-74A0A0B4J1X5 117 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 NPIPB5A8MRT5 1133 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 TEX22C9J3V5 150 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 NDUFA4O00483 81 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 ARPC2O15144 300 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 MAS1P04201 325 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 MRPL3P09001 348 aaKnown RBP7.35□□□□□ -1.23
ATXN3-201ENST00000340660 OR2B8PP59922 312 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 KLK9Q2XQG4 91 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 IDO2Q6ZQW0 420 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 TCF24Q7RTU0 167 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 SLC25A42Q86VD7 318 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 CBR4Q8N4T8 237 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 TMEM116Q8NCL8 245 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 OR8J3Q8NGG0 315 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 CYYR1Q96J86 154 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 C7orf34Q96L11 122 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 HARBI1Q96MB7 349 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 CMTM3Q96MX0 182 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 C7orf26Q96N11 449 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 SPIN2AQ99865 258 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 SPIN2BQ9BPZ2 258 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 KLK9Q9UKQ9 250 aa7.35□□□□□ -1.23
ATXN3-201ENST00000340660 LOC102723971A0A1B0GUV8 181 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 LOC107986453A0A1B0GWG9 222 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 CGB1A6NKQ9 187 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 C15orf62A8K5M9 175 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 DNASE2O00115 360 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-201ENST00000340660 GEMIN2O14893 280 aaKnown RBP7.34□□□□□ -1.23
ATXN3-201ENST00000340660 SIVA1O15304 175 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 MT-ND2P03891 347 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 PLA2G7Q13093 441 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 RASSF6Q6ZTQ3 369 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 GAPTQ8N292 157 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 OR2T12Q8NG77 320 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 NRG4Q8WWG1 115 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 ASB17Q8WXJ9 295 aa7.34□□□□□ -1.23
ATXN3-201ENST00000340660 LGALS13Q9UHV8 139 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms