RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
BRCC3-202ENST00000340647 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
BRCC3-202ENST00000340647 SAP30O75446 220 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 PRH1P02810 166 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 FCER2P06734 321 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 AADACP22760 399 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 KLF5Q13887 457 aaPredicted RBP13.04□□□□□ -0.32
BRCC3-202ENST00000340647 ZNF343Q6P1L6 599 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 BEST4Q8NFU0 473 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 TMEM68Q96MH6 324 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 CCL28Q9NRJ3 127 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 ZNF355PQ9NSJ1 428 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 STAB2Q8WWQ8 2551 aa13.04□□□□□ -0.32
BRCC3-202ENST00000340647 A0A0A6YYH2 397 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 TRBV9A0A0B4J1U6 114 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 ANKRD34BA5PLL1 514 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 A6NJ64 397 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 CDK10Q15131 360 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 TNXAQ16473 311 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 VMA21Q3ZAQ7 101 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 C19orf35Q6ZS72 473 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 PUSL1Q8N0Z8 303 aaKnown RBP13.03□□□□□ -0.32
BRCC3-202ENST00000340647 MFSD4AQ8N468 514 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 ASCL2Q99929 193 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 TAS2R8Q9NYW2 309 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 DMRT1Q9Y5R6 373 aa13.03□□□□□ -0.32
BRCC3-202ENST00000340647 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.33
BRCC3-202ENST00000340647 CGB1A6NKQ9 187 aa13.02□□□□□ -0.33
BRCC3-202ENST00000340647 TEX22C9J3V5 150 aa13.02□□□□□ -0.33
BRCC3-202ENST00000340647 IGLV1-51P01701 117 aa13.02□□□□□ -0.33
BRCC3-202ENST00000340647 IL6RP08887 468 aaPredicted RBP13.02□□□□□ -0.33
BRCC3-202ENST00000340647 FCGR2CP31995 323 aa13.02□□□□□ -0.33
BRCC3-202ENST00000340647 LSM3P62310 102 aaKnown RBP13.02□□□□□ -0.33
BRCC3-202ENST00000340647 RANGRFQ9HD47 186 aaPredicted RBP13.02□□□□□ -0.33
BRCC3-202ENST00000340647 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.33
BRCC3-202ENST00000340647 C13orf42A0A1B0GVH6 325 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 HMX3A6NHT5 357 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 XRCC3O43542 346 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 AIREO43918 545 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 OR9G9P0C7N8 305 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 GP9P14770 177 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 MYOD1P15172 320 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 CD40LGP29965 261 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 CBX3Q13185 183 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 DCTN2Q13561 401 aaKnown RBP13.01□□□□□ -0.33
BRCC3-202ENST00000340647 Q8N1Y9 231 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 TSPAN14Q8NG11 270 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 OR13F1Q8NGS4 319 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 ACOT12Q8WYK0 555 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 WWC2-AS2Q96NR7 200 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 HSD17B10Q99714 261 aaKnown RBP13.01□□□□□ -0.33
BRCC3-202ENST00000340647 AKIP1Q9NQ31 210 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 COA4Q9NYJ1 87 aa13.01□□□□□ -0.33
BRCC3-202ENST00000340647 A0A0G2JLM5 398 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 TNFSF12O43508 249 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 SLC22A5O76082 557 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 PPYP01298 95 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 ADAMTSL5Q6ZMM2 481 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 ZNF66Q6ZN08 573 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 MMD2Q8IY49 270 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 TTC9CQ8N5M4 171 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 TMEM167AQ8TBQ9 72 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 TCTEX1D2Q8WW35 142 aa13□□□□□ -0.33
BRCC3-202ENST00000340647 PEF1Q9UBV8 284 aaKnown RBP13□□□□□ -0.33
BRCC3-202ENST00000340647 A0A087WXM4 84 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 TMEM127O75204 238 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 KBTBD11O94819 623 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 LY86O95711 162 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 NHLRC4P0CG21 123 aaPredicted RBP12.99□□□□□ -0.33
BRCC3-202ENST00000340647 MSMO1Q15800 293 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 SECTM1Q8WVN6 248 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 GIMAP1Q8WWP7 306 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 USMG5Q96IX5 58 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 PHB2Q99623 299 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 THAP7Q9BT49 309 aaPredicted RBP12.99□□□□□ -0.33
BRCC3-202ENST00000340647 DCUN1D5Q9BTE7 237 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 DIABLOQ9NR28 239 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 PRELID3BQ9Y3B1 194 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 SMAD5-AS1Q9Y6J3 95 aa12.99□□□□□ -0.33
BRCC3-202ENST00000340647 TRAV3A0A0B4J244 114 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 BMPR1BO00238 502 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 OR2A4O95047 310 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 CSN3P07498 182 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 ZNF735P0CB33 412 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 NAT1P18440 290 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 ZP3P21754 424 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 MECP2P51608 486 aaKnown RBP12.98□□□□□ -0.33
BRCC3-202ENST00000340647 SYNJ2BPP57105 145 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 ARPC4P59998 168 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 NCS1P62166 190 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 RHOGP84095 191 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 KLK9Q2XQG4 91 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 ZNF818PQ6ZRF7 136 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 OR5AP2Q8NGF4 316 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 OR9G4Q8NGQ1 327 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 OR6Q1Q8NGQ2 317 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 OR4S2Q8NH73 311 aa12.98□□□□□ -0.33
BRCC3-202ENST00000340647 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms