RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TNCP24821 2201 aa11.7□□□□□ -0.54
NIPAL3-202ENST00000339255 A0A0U1RQK1 487 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 C5orf51A6NDU8 294 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 OR2A4O95047 310 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 IGKV1-5P01602 117 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 GIPP09681 153 aaPredicted RBP11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 FAM106CPP0CH98 169 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 G6PCP35575 357 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 H2BFSP57053 126 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 THOC7Q6I9Y2 204 aaKnown RBP11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 H2BFWTQ7Z2G1 175 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 THNSL2Q86YJ6 484 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 OR2T10Q8NGZ9 312 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 VSTM2AQ8TAG5 236 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 OR2A7Q96R45 310 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 TSNAXQ99598 290 aaKnown RBP11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 PDCD10Q9BUL8 212 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 CACFD1Q9UGQ2 172 aa11.69□□□□□ -0.54
NIPAL3-202ENST00000339255 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 A0A1B0GU03 582 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 FAM25EA8MYX2 175 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 CCSO14618 274 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 CCNKO75909 580 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 SPDEFO95238 335 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 MOSP00540 346 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 RPS16P62249 146 aaKnown RBP11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 SRSF4Q08170 494 aaKnown RBP11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 C2orf68Q2NKX9 166 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 C13orf42A0A1B0GVH6 325 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 PFDN1O60925 122 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 FGF2P09038 288 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 P0C879 139 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 RAP2BP61225 183 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 EBI3Q14213 229 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 IAH1Q2TAA2 248 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 VMA21Q3ZAQ7 101 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 FAM120AOSQ5T036 256 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 C2orf50Q96LR7 162 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 NMES1Q9C002 83 aa11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-202ENST00000339255 MTORP42345 2549 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 IGKV1D-33P01593 117 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 IGKV1-33P01594 117 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 SNRNP70P08621 437 aaKnown RBP11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 CD99P14209 185 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 UBE2KP61086 200 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 CD83Q01151 205 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 HES1Q14469 280 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 SMCO1Q147U7 214 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 LRRC75BQ2VPJ9 315 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 OR8H1Q8NGG4 311 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 OR4A5Q8NH83 315 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 OR10C1Q96KK4 312 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 RANBP3Q9H6Z4 567 aaPredicted RBP11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 TMEM140Q9NV12 185 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 BET1LQ9NYM9 111 aa11.67□□□□□ -0.54
NIPAL3-202ENST00000339255 HIVEP1P15822 2718 aa11.66□□□□□ -0.54
NIPAL3-202ENST00000339255 AKAP9Q99996 3911 aa11.66□□□□□ -0.54
NIPAL3-202ENST00000339255 MPTX1A8MV57 137 aa11.66□□□□□ -0.54
NIPAL3-202ENST00000339255 SAA1P0DJI8 122 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-202ENST00000339255 OR4A47Q6IF82 309 aa11.66□□□□□ -0.54
NIPAL3-202ENST00000339255 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-202ENST00000339255 ZFP57Q9NU63 452 aa11.66□□□□□ -0.54
NIPAL3-202ENST00000339255 A0A0G2JRQ6 117 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 SNAPC5O75971 98 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 KBTBD11O94819 623 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 SIX6O95475 246 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 IGLV2-23P01705 113 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 SRP14P37108 136 aaKnown RBP11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 SSX9Q7RTT3 188 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 FOXRED2Q8IWF2 684 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 VKORC1L1Q8N0U8 176 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 PUSL1Q8N0Z8 303 aaKnown RBP11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 TEX45Q8NA69 505 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 ZBTB8BQ8NAP8 495 aaPredicted RBP11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 GPR146Q96CH1 333 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 ST6GAL2Q96JF0 529 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 CACNG5Q9UF02 275 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 F8P00451 2351 aa11.65□□□□□ -0.54
NIPAL3-202ENST00000339255 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 TMEM11P17152 192 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 PAX6P26367 422 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 MMDQ15546 238 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 AARDQ4LEZ3 155 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 TCTE3Q8IZS6 198 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 Q8N6K4 173 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 NPBQ8NG41 125 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 OR1S1Q8NH92 325 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 SSX3Q99909 188 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 NEURL2Q9BR09 285 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 CHIAQ9BZP6 476 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 RANGRFQ9HD47 186 aaPredicted RBP11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 C1RLQ9NZP8 487 aa11.65□□□□□ -0.55
NIPAL3-202ENST00000339255 GSKIPQ9P0R6 139 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms