RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 IGKV3D-15A0A087WSY6 115 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 CRPP02741 224 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 CIRBPQ14011 172 aaKnown RBP6.24□□□□□ -1.41
EPHA3-201ENST00000336596 PIGYQ3MUY2 71 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 RAB24Q969Q5 203 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 GGACTQ9BVM4 153 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 B4DEV8 164 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 HSBP1O75506 76 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 IGKV1D-33P01593 117 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 IGKV1-33P01594 117 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 RFPL3SP0C7P2 107 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 OR10J1P30954 320 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 PTTG1IPP53801 180 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 DLK1P80370 383 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 DEFB121Q5J5C9 76 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 NCMAPQ5T1S8 102 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 PQLC2Q6ZP29 291 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 CLRN3Q8NCR9 226 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 RNASEH2CQ8TDP1 164 aaKnown RBP6.24□□□□□ -1.41
EPHA3-201ENST00000336596 ITLN2Q8WWU7 325 aaPredicted RBP6.24□□□□□ -1.41
EPHA3-201ENST00000336596 TMPRSS13Q9BYE2 586 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 FBXL7Q9UJT9 491 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 FOXA2Q9Y261 457 aaPredicted RBP6.24□□□□□ -1.41
EPHA3-201ENST00000336596 PHLDA3Q9Y5J5 127 aa6.24□□□□□ -1.41
EPHA3-201ENST00000336596 IQCJQ1A5X6 159 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 AQP3Q92482 292 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 NEURL2Q9BR09 285 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 ZNF257Q9Y2Q1 563 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 LOC102723971A0A1B0GUV8 181 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 EGR1P18146 543 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 CD1BP29016 333 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 LDLRAD2Q5SZI1 272 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 ALKAL2Q6UX46 152 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 PPP1R1CQ8WVI7 109 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 USMG5Q96IX5 58 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 MS4A10Q96PG2 267 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 DUX3Q96PT4 197 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 TMEM133Q9H2Q1 129 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 TMEM140Q9NV12 185 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 STAG3L2P0CL84 134 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 ANOS1P23352 680 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 SUCLG1P53597 346 aaKnown RBP6.23□□□□□ -1.41
EPHA3-201ENST00000336596 TMEM50BP56557 158 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 SERF2P84101 59 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 TEX45Q8NA69 505 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 SDF2L1Q9HCN8 221 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 AP5S1Q9NUS5 200 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 HSPB8Q9UJY1 196 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 IGKV3-7A0A075B6H7 116 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 CDRT15L2A8MXV6 281 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 CST7O76096 145 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 PI3P19957 117 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 PMCHP20382 165 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 TGFBR1P36897 503 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 PRSS12P56730 875 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 CX3CL1P78423 397 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 PVRIGQ6DKI7 326 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 MDS2Q8NDY4 140 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 MRAP2Q96G30 205 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 MUC6Q6W4X9 2439 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 FAM223BA6NKX1 122 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 ZIC3O60481 467 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 LCN12Q6JVE5 192 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 PIP4P1Q86T03 277 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 FAM223AQ8IWN6 122 aa6.23□□□□□ -1.41
EPHA3-201ENST00000336596 C2orf16Q68DN1 1984 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 GGCTO75223 188 aaKnown RBP6.22□□□□□ -1.41
EPHA3-201ENST00000336596 PSG2P11465 335 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 MS4A3Q96HJ5 214 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 C21orf62Q9NYP8 219 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 HELZP42694 1942 aaKnown RBP6.22□□□□□ -1.41
EPHA3-201ENST00000336596 IGHV3-13P01766 116 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 CELA3AP09093 270 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 ZNF688P0C7X2 276 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 CTF1Q16619 201 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 WDFY1Q8IWB7 410 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 OR51G1Q8NGK1 321 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 OR10C1Q96KK4 312 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 IGHV3OR16-10A0A075B7F0 116 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 NPIPB9F8W1W9 429 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 CEACAM4O75871 244 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 CD99P14209 185 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 NMUP48645 174 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 DYNLT3P51808 116 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 SUMO1P63165 101 aaKnown RBP6.22□□□□□ -1.41
EPHA3-201ENST00000336596 LINC00303Q3SY05 128 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 RMI2Q96E14 147 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 A0A0G2JMM0 328 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 A0A1W2PPB8 328 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 A0A1W2PRS3 328 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 KIR3DP1A8MWS1 328 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 MFNGO00587 321 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 COTL1Q14019 142 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 FAM71F2Q6NXP2 309 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 SPSB3Q6PJ21 355 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 CLDND2Q8NHS1 167 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 ARL2-SNX15V9GYD0 113 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 KIAA1671Q9BY89 1806 aa6.22□□□□□ -1.41
EPHA3-201ENST00000336596 IGKV1D-42A0A075B6H8 117 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms