RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 CEACAM8P31997 349 aaPredicted RBP9.44□□□□□ -0.9
POLR1B-202ENST00000333990 RAB9AP51151 201 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF273Q14593 569 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 NCMAPQ5T1S8 102 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 DPPA3Q6W0C5 159 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 C16orf82Q7Z2V1 217 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 ZCCHC24Q8N2G6 241 aaKnown RBP9.44□□□□□ -0.9
POLR1B-202ENST00000333990 MRPL30Q8TCC3 161 aaKnown RBP9.44□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF430Q9H8G1 570 aaPredicted RBP9.44□□□□□ -0.9
POLR1B-202ENST00000333990 CACNA1AO00555 2505 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 DEDDO75618 318 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 USF2Q15853 346 aaPredicted RBP9.44□□□□□ -0.9
POLR1B-202ENST00000333990 CENPVQ7Z7K6 275 aaPredicted RBP9.44□□□□□ -0.9
POLR1B-202ENST00000333990 RBKSQ9H477 322 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 PROK2Q9HC23 129 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 PHF3Q92576 2039 aaKnown RBP9.44□□□□□ -0.9
POLR1B-202ENST00000333990 OR10J1P30954 320 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 C3orf36Q3SXR2 165 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 NHLRC3Q5JS37 347 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 MYPOPQ86VE0 399 aaPredicted RBP9.44□□□□□ -0.9
POLR1B-202ENST00000333990 METTL26Q96S19 204 aa9.44□□□□□ -0.9
POLR1B-202ENST00000333990 M0QZK8 103 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 ATP6V0CP27449 155 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 TMEM133Q9H2Q1 129 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 YAE1D1Q9NRH1 226 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 UCP1P25874 307 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 PNRC1Q12796 327 aaPredicted RBP9.43□□□□□ -0.9
POLR1B-202ENST00000333990 HLA-DRB5Q30154 266 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 CXorf66Q5JRM2 361 aaPredicted RBP9.43□□□□□ -0.9
POLR1B-202ENST00000333990 LAMTOR1Q6IAA8 161 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 DCTN5Q9BTE1 182 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 TRBV6-7A0A0A0MS04 114 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 GATCO43716 136 aaKnown RBP9.43□□□□□ -0.9
POLR1B-202ENST00000333990 PTBP3O95758 552 aaKnown RBP9.43□□□□□ -0.9
POLR1B-202ENST00000333990 RND2P52198 227 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 TMEM187Q14656 261 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 ANKRD55Q3KP44 614 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 WDR31Q8NA23 367 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF439Q8NDP4 499 aa9.43□□□□□ -0.9
POLR1B-202ENST00000333990 SERTM2A0A1B0GWG4 89 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 RBFOX3A6NFN3 312 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 PAX6P26367 422 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 LGALSLQ3ZCW2 172 aaPredicted RBP9.42□□□□□ -0.9
POLR1B-202ENST00000333990 CLEC9AQ6UXN8 241 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 LRP11Q86VZ4 500 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 WDFY1Q8IWB7 410 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 VAX2Q9UIW0 290 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 HEATR5AQ86XA9 2040 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 IGHV3OR16-10A0A075B7F0 116 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 A0A1W2PPQ1 181 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 G3V3Q6 166 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 LINC00869P0C866 280 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 ATP5G2Q06055 141 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 RPL39P5Q59GN2 51 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 DHRS11Q6UWP2 260 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 SSX7Q7RTT5 188 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 PAQR4Q8N4S7 273 aaPredicted RBP9.42□□□□□ -0.9
POLR1B-202ENST00000333990 OR52M1Q8NGK5 317 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 PLPPR1Q8TBJ4 325 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 TXNDC17Q9BRA2 123 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 FER1L5A0AVI2 2057 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 A0A0G2JLM5 398 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 DPRXA6NFQ7 191 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF705GA8MUZ8 300 aaPredicted RBP9.42□□□□□ -0.9
POLR1B-202ENST00000333990 RD3LP0DJH9 198 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 CCL3L1P16619 93 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 PRR30Q53SZ7 412 aaPredicted RBP9.42□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF497Q6ZNH5 498 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 PQLC2Q6ZP29 291 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 SMIM8Q96KF7 97 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 TRAF4Q9BUZ4 470 aaPredicted RBP9.42□□□□□ -0.9
POLR1B-202ENST00000333990 PNRC2Q9NPJ4 139 aaKnown RBP9.42□□□□□ -0.9
POLR1B-202ENST00000333990 PXMP4Q9Y6I8 212 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 SCN8AQ9UQD0 1980 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 CADP27708 2225 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 MOSP00540 346 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 ZNF250P15622 560 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
POLR1B-202ENST00000333990 LYRM2Q9NU23 88 aaPredicted RBP9.42□□□□□ -0.9
POLR1B-202ENST00000333990 IGKV3-7A0A075B6H7 116 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 IGHV3-21A0A0B4J1V1 117 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 SFTA3P0C7M3 94 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 RELQ04864 619 aaPredicted RBP9.41□□□□□ -0.9
POLR1B-202ENST00000333990 NPFFR1Q9GZQ6 430 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 IL36RNQ9UBH0 155 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 GTF3C1Q12789 2109 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 KIAA1324LA8MWY0 1029 aaPredicted RBP9.41□□□□□ -0.9
POLR1B-202ENST00000333990 LYNX1G3V0Z9 82 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 TMEM178BH3BS89 294 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 CLDN34H7C241 214 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 LYNX1P0DP58 116 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 FGF8P55075 233 aaPredicted RBP9.41□□□□□ -0.9
POLR1B-202ENST00000333990 NHLH2Q02577 135 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 IGFL2Q6UWQ7 119 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
POLR1B-202ENST00000333990 OR4C12Q96R67 309 aa9.41□□□□□ -0.9
POLR1B-202ENST00000333990 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms