RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 PILRBQ9UKJ0 227 aa10.05□□□□□ -0.8
LIMK2-202ENST00000333611 IGKV1D-13A0A0B4J2D9 117 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 FOXI3A8MTJ6 420 aaPredicted RBP10.04□□□□□ -0.8
LIMK2-202ENST00000333611 IGKV1-13P0DP09 117 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 BCL3P20749 454 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 FER1L6-AS1Q8NA97 138 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 PYGO2Q9BRQ0 406 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 CLEC7AQ9BXN2 247 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 ELOVL5Q9NYP7 299 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 DYSFO75923 2080 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 ICE1Q9Y2F5 2266 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 TRAV8-6A0A0B4J262 113 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 TOMM40O96008 361 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 SLC25A6P12236 298 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 GCSAMLQ5JQS6 135 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 NABP1Q96AH0 204 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 APOBEC3DQ96AK3 386 aaPredicted RBP10.04□□□□□ -0.8
LIMK2-202ENST00000333611 GPR146Q96CH1 333 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 MTCH1Q9NZJ7 389 aa10.04□□□□□ -0.8
LIMK2-202ENST00000333611 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 SYNGR4O95473 234 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 IGLL1P15814 213 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 AZU1P20160 251 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
LIMK2-202ENST00000333611 LCN2P80188 198 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 PSG4Q00888 419 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 WIPI1Q5MNZ9 446 aaPredicted RBP10.03□□□□□ -0.8
LIMK2-202ENST00000333611 LHFPL2Q6ZUX7 228 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 SMRP1Q8NCR6 262 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 OR8B2Q96RD0 313 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 SF3B5Q9BWJ5 86 aaKnown RBP10.03□□□□□ -0.8
LIMK2-202ENST00000333611 TP53TG3Q9ULZ0 132 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 CHCHD2Q9Y6H1 151 aaPredicted RBP10.03□□□□□ -0.8
LIMK2-202ENST00000333611 IGKV1D-33P01593 117 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 IGKV1-33P01594 117 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 CFIP05156 583 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 RAB9AP51151 201 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 RPL15P61313 204 aaKnown RBP10.03□□□□□ -0.8
LIMK2-202ENST00000333611 PAX2Q02962 417 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 SSX8Q7RTT4 187 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 SSC4DQ8WTU2 575 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 TMEM56Q96MV1 263 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 QTRT1Q9BXR0 403 aaKnown RBP10.03□□□□□ -0.8
LIMK2-202ENST00000333611 TMEM222Q9H0R3 208 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 WDFY4Q6ZS81 3184 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 VDAC1P21796 283 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 HES3Q5TGS1 186 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 CFAP161Q6P656 301 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 FOXB1Q99853 325 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
LIMK2-202ENST00000333611 A0A0G2JMM0 328 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 A0A1W2PPB8 328 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 A0A1W2PQM1 296 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 SLC22A20A6NK97 555 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 KIR3DP1A8MWS1 328 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 S1PR2O95136 353 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 CA2P00918 260 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 PSG2P11465 335 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 SRPXP78539 464 aa10.02□□□□□ -0.8
LIMK2-202ENST00000333611 C17orf82Q86X59 251 aaPredicted RBP10.02□□□□□ -0.8
LIMK2-202ENST00000333611 SYNGR2O43760 224 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 TUSC2O75896 110 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 GPR6P46095 362 aaPredicted RBP10.02□□□□□ -0.81
LIMK2-202ENST00000333611 SSR4P51571 173 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 RBM11P57052 281 aaKnown RBP10.02□□□□□ -0.81
LIMK2-202ENST00000333611 WDR5BQ86VZ2 330 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 RPS19BP1Q86WX3 136 aaKnown RBP10.02□□□□□ -0.81
LIMK2-202ENST00000333611 TAF15Q92804 592 aaKnown RBP eCLIP10.02□□□□□ -0.811e-5■■■□□ 19
LIMK2-202ENST00000333611 SRSF8Q9BRL6 282 aaKnown RBP10.02□□□□□ -0.81
LIMK2-202ENST00000333611 CHODLQ9H9P2 273 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 C7orf71A4D174 169 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 C5orf49A4QMS7 147 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 MMP23AO75900 390 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 EPHA8P29322 1005 aaPredicted RBP10.02□□□□□ -0.81
LIMK2-202ENST00000333611 NTF4P34130 210 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 CKS1BP61024 79 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 MRPL21Q7Z2W9 205 aaKnown RBP10.02□□□□□ -0.81
LIMK2-202ENST00000333611 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 OR8B3Q8NGG8 313 aa10.02□□□□□ -0.81
LIMK2-202ENST00000333611 GMPPAQ96IJ6 420 aaPredicted RBP10.02□□□□□ -0.81
LIMK2-202ENST00000333611 NBEAQ8NFP9 2946 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 A0A0G2JRQ6 117 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 SH2D7A6NKC9 451 aaPredicted RBP10.01□□□□□ -0.81
LIMK2-202ENST00000333611 IGLV3-19P01714 112 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 COX5AP20674 150 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 SPATA46Q5T0L3 261 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 ACSM6Q6P461 480 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 Q6ZPA2 131 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 NHLRC2Q8NBF2 726 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 OR1A1Q9P1Q5 309 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 SCO2A0A1W2PP80 73 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 IGLC7A0M8Q6 106 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 ZNF324O75467 553 aaPredicted RBP10.01□□□□□ -0.81
LIMK2-202ENST00000333611 FAM27BQ5VT28 67 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 ZIC4Q8N9L1 334 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 C5orf17Q8NAS9 161 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 PERPQ96FX8 193 aa10.01□□□□□ -0.81
LIMK2-202ENST00000333611 SIGLEC12Q96PQ1 595 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms