RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 S100GP29377 79 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 CDX1P47902 265 aaPredicted RBP10.97□□□□□ -0.65
LIMS1-201ENST00000332345 GNB1P62873 340 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 SSBP1Q04837 148 aaKnown RBP10.97□□□□□ -0.65
LIMS1-201ENST00000332345 PJVKQ0ZLH3 352 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 IL18Q14116 193 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 ECSCRQ19T08 205 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 RNASE12Q5GAN4 147 aaKnown RBP10.97□□□□□ -0.65
LIMS1-201ENST00000332345 VAX1Q5SQQ9 334 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 UNQ5815/PRO19632Q6UWF5 114 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 ZNF695Q8IW36 515 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 POC5Q8NA72 575 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 VSTM2AQ8TAG5 236 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 ARPC1AQ92747 370 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 GPHA2Q96T91 129 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 NXF2Q9GZY0 626 aaKnown RBP10.97□□□□□ -0.65
LIMS1-201ENST00000332345 TPSG1Q9NRR2 321 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 FOXA2Q9Y261 457 aaPredicted RBP10.97□□□□□ -0.65
LIMS1-201ENST00000332345 A3GALT2U3KPV4 340 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 TNCP24821 2201 aa10.97□□□□□ -0.65
LIMS1-201ENST00000332345 GPR31O00270 319 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 CTDSPLO15194 276 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 RBFOX2O43251 390 aaKnown RBP eCLIP10.96□□□□□ -0.65
LIMS1-201ENST00000332345 ACTL6BO94805 426 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 IGLV1-40P01703 118 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 TNFSF8P32971 234 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 RAB9AP51151 201 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 TAS2R19P59542 299 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 NDPQ00604 133 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 PRSS8Q16651 343 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 RNASE10Q5GAN6 216 aaKnown RBP10.96□□□□□ -0.65
LIMS1-201ENST00000332345 AADACL3Q5VUY0 350 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 SPAG16Q8N0X2 631 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 TMEM229BQ8NBD8 167 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 KLHL30-AS1Q8NEE0 82 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 LFNGQ8NES3 379 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 OR5M8Q8NGP6 311 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 GRPEL2Q8TAA5 225 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 TMEM68Q96MH6 324 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 RBM38Q9H0Z9 239 aaKnown RBP10.96□□□□□ -0.65
LIMS1-201ENST00000332345 NDUFA13Q9P0J0 144 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 FBXO7Q9Y3I1 522 aa10.96□□□□□ -0.65
LIMS1-201ENST00000332345 A0A1W2PN81 502 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 FABP12A6NFH5 140 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 M0QYG6 137 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 ARPC1BO15143 372 aaKnown RBP10.95□□□□□ -0.66
LIMS1-201ENST00000332345 PGLYRP1O75594 196 aaPredicted RBP10.95□□□□□ -0.66
LIMS1-201ENST00000332345 OR2A4O95047 310 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 HPRT1P00492 218 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 CD3DP04234 171 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 S100A5P33763 92 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 CHRNA7P36544 502 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 UCP3P55916 312 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 BRWD1-AS2P59051 145 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 DGCR2P98153 550 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 C19orf54Q5BKX5 351 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 IDO2Q6ZQW0 420 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 LCNL1Q6ZST4 164 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 MMD2Q8IY49 270 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 ARRDC1Q8N5I2 433 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 WFDC9Q8NEX5 89 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 OR51H1Q8NH63 302 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 RHOVQ96L33 236 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 OR2A7Q96R45 310 aa10.95□□□□□ -0.66
LIMS1-201ENST00000332345 FAM103A1Q9BTL3 118 aaKnown RBP10.95□□□□□ -0.66
LIMS1-201ENST00000332345 MSGN1A6NI15 193 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 RAMP3O60896 148 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 SAA1P0DJI8 122 aaPredicted RBP10.94□□□□□ -0.66
LIMS1-201ENST00000332345 CD33P20138 364 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 MYCNOSP40205 109 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 TAS2R31P59538 309 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 TNXAQ16473 311 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 C8orf86Q6ZUL3 223 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 SLC38A6Q8IZM9 456 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 ZNF491Q8N8L2 437 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 SMIM4Q8WVI0 70 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 DGCR14Q96DF8 476 aaKnown RBP10.94□□□□□ -0.66
LIMS1-201ENST00000332345 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 RSRP1Q9BUV0 290 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 TINAGL1Q9GZM7 467 aaPredicted RBP10.94□□□□□ -0.66
LIMS1-201ENST00000332345 KLK15Q9H2R5 256 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 ZNF430Q9H8G1 570 aaPredicted RBP10.94□□□□□ -0.66
LIMS1-201ENST00000332345 VSIG4Q9Y279 399 aa10.94□□□□□ -0.66
LIMS1-201ENST00000332345 RAB3DO95716 219 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 CD74P04233 296 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 NQO2P16083 231 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 F2RP25116 425 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 MAS1LP35410 378 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 MEF2DQ14814 521 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 MRGPRG-AS1Q2M3A8 158 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 STEAP1BQ6NZ63 245 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 C18orf65Q6ZTR6 163 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 PUSL1Q8N0Z8 303 aaKnown RBP10.93□□□□□ -0.66
LIMS1-201ENST00000332345 OR4A5Q8NH83 315 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 TERB2Q8NHR7 220 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 C4orf3Q8WVX3 66 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 PHB2Q99623 299 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 SPIN2AQ99865 258 aa10.93□□□□□ -0.66
LIMS1-201ENST00000332345 SPIN2BQ9BPZ2 258 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms