RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CLCC1Q96S66 551 aa20.52■□□□□ 0.88
SMDT1-201ENST00000331479 C14orf166Q9Y224 244 aaKnown RBP20.52■□□□□ 0.88
SMDT1-201ENST00000331479 A0A1B0GUS0 222 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 NAP1L6A6NFF2 107 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 S1PR2O95136 353 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 HLA-DRB1P01911 266 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 BTCP35070 178 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 VDAC2P45880 294 aaPredicted RBP20.51■□□□□ 0.87
SMDT1-201ENST00000331479 UBE2KP61086 200 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 CD300LFQ8TDQ1 290 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 HAX1O00165 279 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 HPRT1P00492 218 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 SAA1P0DJI8 122 aaPredicted RBP20.51■□□□□ 0.87
SMDT1-201ENST00000331479 PJVKQ0ZLH3 352 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 SLC35E3Q7Z769 313 aa20.51■□□□□ 0.87
SMDT1-201ENST00000331479 ADAD2Q8NCV1 583 aaKnown RBP20.51■□□□□ 0.87
SMDT1-201ENST00000331479 C7orf50Q9BRJ6 194 aaKnown RBP20.51■□□□□ 0.87
SMDT1-201ENST00000331479 IGHV7-81A0A0B4J1V7 117 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 CENPXA8MT69 81 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 UPK1BO75841 260 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 LPAR6P43657 344 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 IFITM3Q01628 133 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 MRGPRG-AS1Q2M3A8 158 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 VMA21Q3ZAQ7 101 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 PPP1R27Q86WC6 154 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 TCTEX1D1Q8N7M0 179 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 CCDC71LQ8N9Z2 235 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 TMEM230Q96A57 120 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 SCGB3A2Q96PL1 93 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 TP53RKQ96S44 253 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 PLEKHA2Q9HB19 425 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 LINC00527Q9UJ94 153 aa20.5■□□□□ 0.87
SMDT1-201ENST00000331479 PLXNB1O43157 2135 aa20.49■□□□□ 0.87
SMDT1-201ENST00000331479 SSX9Q7RTT3 188 aa20.49■□□□□ 0.87
SMDT1-201ENST00000331479 TEX45Q8NA69 505 aa20.49■□□□□ 0.87
SMDT1-201ENST00000331479 RHOVQ96L33 236 aa20.49■□□□□ 0.87
SMDT1-201ENST00000331479 NOL4LQ96MY1 436 aaPredicted RBP20.49■□□□□ 0.87
SMDT1-201ENST00000331479 SLC25A21Q9BQT8 299 aaPredicted RBP20.49■□□□□ 0.87
SMDT1-201ENST00000331479 C3orf85A0A1B0GTC6 90 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 LYRM1O43325 122 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 CA2P00918 260 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 TAS2R31P59538 309 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 NDPQ00604 133 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 SP6Q3SY56 376 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 C12orf54Q6X4T0 127 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 WNT10AQ9GZT5 417 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 TBC1D24Q9ULP9 559 aa20.48■□□□□ 0.87
SMDT1-201ENST00000331479 H0Y980 276 aa20.47■□□□□ 0.87
SMDT1-201ENST00000331479 HRASP01112 189 aa20.47■□□□□ 0.87
SMDT1-201ENST00000331479 KRTAP10-3P60369 221 aa20.47■□□□□ 0.87
SMDT1-201ENST00000331479 CX3CL1P78423 397 aa20.47■□□□□ 0.87
SMDT1-201ENST00000331479 SSBP2P81877 361 aaPredicted RBP20.47■□□□□ 0.87
SMDT1-201ENST00000331479 RBMS2Q15434 407 aaKnown RBP20.47■□□□□ 0.87
SMDT1-201ENST00000331479 STAB1Q9NY15 2570 aa20.47■□□□□ 0.87
SMDT1-201ENST00000331479 CRYM-AS1A6NIL9 109 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 RPA2P15927 270 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 NQO2P16083 231 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 PUSL1Q8N0Z8 303 aaKnown RBP20.46■□□□□ 0.87
SMDT1-201ENST00000331479 KLHDC1Q8N7A1 406 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 WFDC12Q8WWY7 111 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 NAA60Q9H7X0 242 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 FAM212BQ9NTI7 297 aaPredicted RBP20.46■□□□□ 0.87
SMDT1-201ENST00000331479 COMMD9Q9P000 198 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 KCNAB3O43448 404 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 IGKV1-39P01597 117 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 IGKV1D-39P04432 117 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 SRSF4Q08170 494 aaKnown RBP20.46■□□□□ 0.87
SMDT1-201ENST00000331479 ZNF562Q6V9R5 426 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 TMED4Q7Z7H5 227 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 R3HDM4Q96D70 268 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 OR51J1Q9H342 316 aa20.46■□□□□ 0.87
SMDT1-201ENST00000331479 TEX13DA0A0J9YY54 714 aaPredicted RBP20.45■□□□□ 0.86
SMDT1-201ENST00000331479 ARPC1BO15143 372 aaKnown RBP20.45■□□□□ 0.86
SMDT1-201ENST00000331479 OR2A4O95047 310 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 NDUFB6O95139 128 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 OR5AC1P0C628 307 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 AKR1C4P17516 323 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 POU2AF1Q16633 256 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 PRSS8Q16651 343 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 OR4A47Q6IF82 309 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 FOXRED2Q8IWF2 684 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 OR2A7Q96R45 310 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 ZNF430Q9H8G1 570 aaPredicted RBP20.45■□□□□ 0.86
SMDT1-201ENST00000331479 PARP11Q9NR21 331 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 FBXO7Q9Y3I1 522 aa20.45■□□□□ 0.86
SMDT1-201ENST00000331479 DNHD1Q96M86 4753 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 ATP6V0E1O15342 81 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 KBTBD11O94819 623 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 KRASP01116 189 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 SERPINE2P07093 398 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 G6PCP35575 357 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 GNB1P62873 340 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 WIPF2Q8TF74 440 aaPredicted RBP20.44■□□□□ 0.86
SMDT1-201ENST00000331479 FLVCR2Q9UPI3 526 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 ANK2Q01484 3957 aa20.44■□□□□ 0.86
SMDT1-201ENST00000331479 MARCH11A6NNE9 402 aa20.43■□□□□ 0.86
SMDT1-201ENST00000331479 AP4M1O00189 453 aa20.43■□□□□ 0.86
SMDT1-201ENST00000331479 EGR2P11161 476 aaPredicted RBP20.43■□□□□ 0.86
SMDT1-201ENST00000331479 SUPT4H1P63272 117 aaKnown RBP20.43■□□□□ 0.86
SMDT1-201ENST00000331479 C10orf99Q6UWK7 81 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms