RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 LINC00205P59089 165 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 SELENOTP62341 195 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 Q0VFX4 171 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 BAGE3Q86Y29 109 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 BAGE2Q86Y30 109 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 SCCPDHQ8NBX0 429 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 OR5AU1Q8NGC0 362 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 OCC1Q8TAD7 63 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 SAMD10Q9BYL1 202 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 OR2J1Q9GZK6 312 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 KCNIP1Q9NZI2 227 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 F2Z2F3 143 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 SLC17A3O00476 420 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 MSL2Q9HCI7 577 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 WIPI2Q9Y4P8 454 aa12.08□□□□□ -0.48
SNX20-202ENST00000330943 C15orf62A8K5M9 175 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 CLDN14O95500 239 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 MT-CO3P00414 261 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 VASH2Q86V25 355 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 IFI44Q8TCB0 444 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 SAP25Q8TEE9 199 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 GALMQ96C23 342 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 RTL8AQ9BWD3 113 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 MRPS18CQ9Y3D5 142 aaKnown RBP12.07□□□□□ -0.48
SNX20-202ENST00000330943 CACNA1DQ01668 2161 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 CDIPTO14735 213 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 CELA3AP09093 270 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
SNX20-202ENST00000330943 GTF3C1Q12789 2109 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 OR5I1Q13606 314 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 ZBTB34Q8NCN2 500 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 RAB1CQ92928 201 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 C12orf77C9JDV5 145 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 SH2D1BO14796 132 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 RAB29O14966 203 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 TFPI2P48307 235 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 HLA-DRB5Q30154 266 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 APH1AQ96BI3 265 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 QTRT1Q9BXR0 403 aaKnown RBP12.07□□□□□ -0.48
SNX20-202ENST00000330943 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
SNX20-202ENST00000330943 MED13Q9UHV7 2174 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 FCN1O00602 326 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 NEURL1O76050 574 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 OR1L6Q8NGR2 347 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 NINJ1Q92982 152 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 FAM103A1Q9BTL3 118 aaKnown RBP12.06□□□□□ -0.48
SNX20-202ENST00000330943 SMG1Q96Q15 3661 aaKnown RBP12.06□□□□□ -0.48
SNX20-202ENST00000330943 PSPNO60542 156 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 FRMD6-AS1P0C7T7 363 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 LINC00614P0C842 121 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 IER3P46695 156 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 CYB561P49447 251 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 EIF4EBP1Q13541 118 aaPredicted RBP12.06□□□□□ -0.48
SNX20-202ENST00000330943 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 SPINK14Q6IE38 97 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 POLDIP2Q9Y2S7 368 aa12.06□□□□□ -0.48
SNX20-202ENST00000330943 IL6RP08887 468 aaPredicted RBP12.05□□□□□ -0.48
SNX20-202ENST00000330943 ERVK11-1P61568 191 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 KRTCAP3Q53RY4 240 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 Q8IYB0 196 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 IL36BQ9NZH7 164 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 RRHO14718 337 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 HBZP02008 142 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 CRYABP02511 175 aaKnown RBP12.05□□□□□ -0.48
SNX20-202ENST00000330943 ESDP10768 282 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 KRTDAPP60985 99 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 MRPS11P82912 194 aaKnown RBP12.05□□□□□ -0.48
SNX20-202ENST00000330943 TRIP6Q15654 476 aaKnown RBP12.05□□□□□ -0.48
SNX20-202ENST00000330943 TMEM249Q2WGJ8 235 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 PDLIM3Q53GG5 364 aaPredicted RBP12.05□□□□□ -0.48
SNX20-202ENST00000330943 RNF114Q9Y508 228 aa12.05□□□□□ -0.48
SNX20-202ENST00000330943 TMEM30CPA0ZSE6 113 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 LINC00473A8K010 186 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 SNURFLB1AK76 121 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 K7EN84 100 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 GRPP07492 148 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 COMPP49747 757 aaPredicted RBP12.04□□□□□ -0.48
SNX20-202ENST00000330943 PSG7Q13046 419 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 ZNF146Q15072 292 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 DEFB123Q8N688 67 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 YTHDF2Q9Y5A9 579 aaKnown RBP12.04□□□□□ -0.48
SNX20-202ENST00000330943 PRR14LQ5THK1 2151 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 DMXL2Q8TDJ6 3036 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 IGHV3-43A0A0B4J1X8 118 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 HAND1O96004 215 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 IGHV3-43DP0DP04 118 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 HOXA4Q00056 320 aaPredicted RBP12.04□□□□□ -0.48
SNX20-202ENST00000330943 AESQ08117 197 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 GUCD1Q96NT3 240 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 TAAR6Q96RI8 345 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 FBXL7Q9UJT9 491 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 AQP7O14520 342 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 CXorf1O96002 111 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 STAG3L2P0CL84 134 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 STAG3L3P0CL85 134 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 CLDN18P56856 261 aa12.04□□□□□ -0.48
SNX20-202ENST00000330943 RPL31P62899 125 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms