RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 IGHV1OR15-9A0A0B4J2B8 117 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 C9JCJ5 164 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 GDF9O60383 454 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 CA2P00918 260 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 CCNOP22674 350 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 CD1BP29016 333 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 CARD18P57730 90 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 B3GALT5-AS1P59052 145 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 TGFBR3Q03167 851 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 EIF4EBP1Q13541 118 aaPredicted RBP10.68□□□□□ -0.7
CCDC60-201ENST00000327554 ZNF497Q6ZNH5 498 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 ATOH7Q8N100 152 aa10.68□□□□□ -0.7
CCDC60-201ENST00000327554 EAF1Q96JC9 268 aaPredicted RBP10.68□□□□□ -0.7
CCDC60-201ENST00000327554 WISP2O76076 250 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 CXorf1O96002 111 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 MT-ND6P03923 174 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 HTD2P86397 168 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 GGNQ86UU5 652 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 OR4C5Q8NGB2 326 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 C11orf52Q96A22 123 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 LY96Q9Y6Y9 160 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 MED12LQ86YW9 2145 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 WDFY3Q8IZQ1 3526 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 FREM1Q5H8C1 2179 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 IGHV1-69-2A0A0G2JMI3 117 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 IGLC7A0M8Q6 106 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 A8MXE2 369 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 SS18L1O75177 396 aaPredicted RBP10.67□□□□□ -0.7
CCDC60-201ENST00000327554 SCRG1O75711 98 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 TNFSF4P23510 183 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 SRD5A2P31213 254 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 BPIFB3P59826 476 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 CX3CL1P78423 397 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 HYAL1Q12794 435 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 OR4F17Q8NGA8 305 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 OR5B3Q8NH48 314 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 DEPPQ9NTK1 212 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 TRAPPC2LQ9UL33 140 aa10.67□□□□□ -0.7
CCDC60-201ENST00000327554 GJE1A6NN92 205 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 C17orf98A8MV24 154 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 M0QZ24 198 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 BMPR1BO00238 502 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 CXCL13O43927 109 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 RHBDL1O75783 438 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 GLB1P16278 677 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 OPRK1P41145 380 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 PCOLCEQ15113 449 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 WDR73Q6P4I2 378 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 C19orf35Q6ZS72 473 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 FAM19A2Q8N3H0 131 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 ZNF645Q8N7E2 425 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 TSKUQ8WUA8 353 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 C19orf25Q9UFG5 118 aaPredicted RBP10.66□□□□□ -0.7
CCDC60-201ENST00000327554 CDC42EP3Q9UKI2 254 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 TRIOO75962 3097 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 TRGV10A0A0A0MS01 117 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 RAB29O14966 203 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 SPINK4O60575 86 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 CLDN14O95500 239 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 IGHV3-9P01782 118 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 SRIP30626 198 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 SPATA46Q5T0L3 261 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 LCN12Q6JVE5 192 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 LOXL4Q96JB6 756 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 CLEC7AQ9BXN2 247 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 PRRG4Q9BZD6 226 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 AKIRIN1Q9H9L7 192 aaPredicted RBP10.66□□□□□ -0.7
CCDC60-201ENST00000327554 SH2D2AQ9NP31 389 aa10.66□□□□□ -0.7
CCDC60-201ENST00000327554 MBNL3Q9NUK0 354 aaKnown RBP10.66□□□□□ -0.7
CCDC60-201ENST00000327554 TRAV30A0A087WSZ9 112 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 C5orf49A4QMS7 147 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 EPOPA6NHQ4 379 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 NEURL1O76050 574 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 NGFP01138 241 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 NXPH1P58417 271 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 IGFBP7Q16270 282 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 PNKDQ8N490 385 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 MGST2Q99735 147 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 OR2D2Q9H210 308 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 HES4Q9HCC6 221 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 COL8A2P25067 703 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 GCHFRP30047 84 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 RHOBP62745 196 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 MIC13Q5XKP0 118 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 STUMQ69YW2 141 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 FAM53AQ6NSI3 398 aaPredicted RBP10.65□□□□□ -0.7
CCDC60-201ENST00000327554 YRDCQ86U90 279 aaKnown RBP10.65□□□□□ -0.7
CCDC60-201ENST00000327554 VASH2Q86V25 355 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 MUC15Q8N387 334 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 ZNF808Q8N4W9 903 aaPredicted RBP10.65□□□□□ -0.7
CCDC60-201ENST00000327554 ZBTB34Q8NCN2 500 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 GGTLC1Q9BX51 225 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
CCDC60-201ENST00000327554 PTPRBP23467 1997 aa10.65□□□□□ -0.71
CCDC60-201ENST00000327554 MPDU1O75352 247 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 OR10J4P0C629 311 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 CLDN18P56856 261 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 TREML4Q6UXN2 200 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 H2BFWTQ7Z2G1 175 aa10.64□□□□□ -0.71
CCDC60-201ENST00000327554 OR4P4Q8NGL7 312 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms