RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CHIAQ9BZP6 476 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 RANGRFQ9HD47 186 aaPredicted RBP8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 NUP50Q9UKX7 468 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 A0A0U1RQK1 487 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 SHOXO15266 292 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 RAP2BP61225 183 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 SPNS3Q6ZMD2 512 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 ZBTB8BQ8NAP8 495 aaPredicted RBP8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 GPR146Q96CH1 333 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 HARBI1Q96MB7 349 aa8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 MS4A7Q9GZW8 240 aaPredicted RBP8.24□□□□□ -1.09
VIPAS39-201ENST00000327028 TLN2Q9Y4G6 2542 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 CSPG4Q6UVK1 2322 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 A0A1B0GU03 582 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 FAM90A9PA6NNJ1 464 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 PAX6P26367 422 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 RPS16P62249 146 aaKnown RBP8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 CYCSP99999 105 aaKnown RBP8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 THOC7Q6I9Y2 204 aaKnown RBP8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 C9orf139Q6ZV77 190 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 TCTE3Q8IZS6 198 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 DMBX1Q8NFW5 382 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 RNF5Q99942 180 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 NMES1Q9C002 83 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 RANBP3Q9H6Z4 567 aaPredicted RBP8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 ACANP16112 2415 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 BRS3P32247 399 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 LGALS7P47929 136 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 H2BFWTQ7Z2G1 175 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 RBMXL1Q96E39 390 aaKnown RBP8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 WDR89Q96FK6 387 aaPredicted RBP8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 RHOVQ96L33 236 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 FYTTD1Q96QD9 318 aaKnown RBP8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 MEGF9Q9H1U4 602 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 TMEM140Q9NV12 185 aa8.23□□□□□ -1.09
VIPAS39-201ENST00000327028 SRRM4A7MD48 611 aaKnown RBP8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 MOSP00540 346 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 IGKV1D-33P01593 117 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 IGKV1-33P01594 117 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 IGLV2-23P01705 113 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 SNRNP70P08621 437 aaKnown RBP8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 FBP1P09467 338 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 SAA1P0DJI8 122 aaPredicted RBP8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 DYNLT3P51808 116 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 CD300CQ08708 224 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 IL15RAQ13261 267 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 EBI3Q14213 229 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 SMCO1Q147U7 214 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 OR4A47Q6IF82 309 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 SSX9Q7RTT3 188 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 THNSL2Q86YJ6 484 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 VKORC1L1Q8N0U8 176 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 PUSL1Q8N0Z8 303 aaKnown RBP8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 OR2T10Q8NGZ9 312 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 TSNAXQ99598 290 aaKnown RBP8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 COA4Q9NYJ1 87 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 CACNG5Q9UF02 275 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 FAM96BQ9Y3D0 163 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 SETXQ7Z333 2677 aaKnown RBP8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 UBE2KP61086 200 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 IZUMO4Q1ZYL8 232 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 VMA21Q3ZAQ7 101 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 Q6ZRM9 215 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 OR4D5Q8NGN0 318 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 BET1LQ9NYM9 111 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 GSKIPQ9P0R6 139 aa8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 ZNF469Q96JG9 3925 aaPredicted RBP8.22□□□□□ -1.09
VIPAS39-201ENST00000327028 PITX3O75364 302 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 SPDEFO95238 335 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 IL6RP08887 468 aaPredicted RBP8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 OR9G9P0C7N8 305 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 AANATQ16613 207 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 Q8N6K4 173 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 OR1S1Q8NH92 325 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 VSTM2AQ8TAG5 236 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 EAF1Q96JC9 268 aaPredicted RBP8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 RITA1Q96K30 269 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 ARPC5LQ9BPX5 153 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 YAE1D1Q9NRH1 226 aa8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 SOX21Q9Y651 276 aaPredicted RBP8.21□□□□□ -1.09
VIPAS39-201ENST00000327028 FAM106CPP0CH98 169 aa8.21□□□□□ -1.1
VIPAS39-201ENST00000327028 PSG5Q15238 335 aa8.21□□□□□ -1.1
VIPAS39-201ENST00000327028 LRRC75BQ2VPJ9 315 aa8.21□□□□□ -1.1
VIPAS39-201ENST00000327028 FAM120AOSQ5T036 256 aa8.21□□□□□ -1.1
VIPAS39-201ENST00000327028 FOXRED2Q8IWF2 684 aa8.21□□□□□ -1.1
VIPAS39-201ENST00000327028 OR2T35Q8NGX2 323 aa8.21□□□□□ -1.1
VIPAS39-201ENST00000327028 OR4A5Q8NH83 315 aa8.21□□□□□ -1.1
VIPAS39-201ENST00000327028 UPK2O00526 184 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 KBTBD11O94819 623 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 FOSL1P15407 271 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 CD24P25063 80 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 RELBQ01201 579 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 HES1Q14469 280 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 AARDQ4LEZ3 155 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 FBLN7Q53RD9 439 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 TMEM167AQ8TBQ9 72 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 PPP1R1CQ8WVI7 109 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.2□□□□□ -1.1
VIPAS39-201ENST00000327028 TMEM160Q9NX00 188 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms