RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 TCF24Q7RTU0 167 aa6.52□□□□□ -1.37
CD46-201ENST00000322875 C5orf30Q96GV9 206 aa6.52□□□□□ -1.37
CD46-201ENST00000322875 PRDM6Q9NQX0 595 aa6.52□□□□□ -1.37
CD46-201ENST00000322875 CXorf1O96002 111 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 PSG1P11464 419 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 PMCHP20382 165 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 EBLN2Q6P2I7 272 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 SPATA12Q7Z6I5 190 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 OR8I2Q8N0Y5 310 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 DEFB125Q8N687 156 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 SCCPDHQ8NBX0 429 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 ZDHHC16Q969W1 377 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 SF3B5Q9BWJ5 86 aaKnown RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 KMT2EQ8IZD2 1858 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 DLL1O00548 723 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 CRXO43186 299 aaPredicted RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 CLDN18P56856 261 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 TMPRSS3P57727 454 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 RPL31P62899 125 aaKnown RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 SPATA46Q5T0L3 261 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 LCN12Q6JVE5 192 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 Q6P435 159 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 CLEC2AQ6UVW9 174 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 TMPRSS7Q7RTY8 843 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 C1orf159Q96HA4 380 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 GP6Q9HCN6 339 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 DLL3Q9NYJ7 618 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 C1RLQ9NZP8 487 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 EML6Q6ZMW3 1958 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 SMIM27A0A1W2PRY6 76 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 CBY3A6NI87 242 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 HSBP1L1C9JCN9 74 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 ZIC3O60481 467 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 CA3P07451 260 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 GPM6AP51674 278 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 MRPS21P82921 87 aaKnown RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 KLF5Q13887 457 aaPredicted RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 FAM69BQ5VUD6 431 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 MKXQ8IYA7 352 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 ATOH7Q8N100 152 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 FAM19A2Q8N3H0 131 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 C18orf32Q8TCD1 76 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 WIPF2Q8TF74 440 aaPredicted RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 SPACA9Q96E40 222 aaPredicted RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 VPS25Q9BRG1 176 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 SRXN1Q9BYN0 137 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 MBNL3Q9NUK0 354 aaKnown RBP6.51□□□□□ -1.37
CD46-201ENST00000322875 NAT8BQ9UHF3 227 aa6.51□□□□□ -1.37
CD46-201ENST00000322875 TRANK1O15050 2925 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 FAM181BA6NEQ2 426 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 G3V3Y1 287 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 SYNGR1O43759 233 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 MPDU1O75352 247 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 HLA-DQA1P01909 254 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 AMY1AP04745 511 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 B4GALT1P15291 398 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 SRIP30626 198 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 ZNF497Q6ZNH5 498 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 LHFPL4Q7Z7J7 247 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 NUDT11Q96G61 164 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 OR2D2Q9H210 308 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 PROK2Q9HC23 129 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 OSTCQ9NRP0 149 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 A0A1W2PPC4 97 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 ZNF716A6NP11 495 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 TRAPPC2LH3BP13 241 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 LINC00869P0C866 280 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 APOBEC3AP31941 199 aaPredicted RBP6.5□□□□□ -1.37
CD46-201ENST00000322875 G6PCP35575 357 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 RPL30P62888 115 aaKnown RBP6.5□□□□□ -1.37
CD46-201ENST00000322875 KIAA1644Q3SXP7 199 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 BVES-AS1Q5T3Y7 98 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 FAM71F2Q6NXP2 309 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 VWA1Q6PCB0 445 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 MOB1BQ7L9L4 216 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 ARL2-SNX15V9GYD0 113 aa6.5□□□□□ -1.37
CD46-201ENST00000322875 A0A0J9YW62 118 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 RAB29O14966 203 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 HYAL1Q12794 435 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 VAMP3Q15836 100 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 FAM120AOSQ5T036 256 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 SLC35E4Q6ICL7 350 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 VHLLQ6RSH7 139 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 TREML4Q6UXN2 200 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 ZBTB34Q8NCN2 500 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 SMIM12Q96EX1 92 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 MGST2Q99735 147 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 RNF24Q9Y225 148 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 CEP192Q8TEP8 1941 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 IGHV1OR21-1A0A087WYE8 117 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 A0A1W2PPV4 95 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 DNPH1O43598 174 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 ZFAND5O76080 213 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 CLDN14O95500 239 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 IGLV2-8P01709 118 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 CELA3BP08861 270 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 GCHFRP30047 84 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 REG1BP48304 166 aa6.49□□□□□ -1.37
CD46-201ENST00000322875 HLA-BQ31612 363 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms