RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 VDAC2P45880 294 aaPredicted RBP18.47■□□□□ 0.55
PNKP-201ENST00000322344 TMEM241Q24JQ0 296 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 ADTRPQ96IZ2 230 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 GCM1Q9NP62 436 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 HEYLQ9NQ87 328 aaPredicted RBP18.47■□□□□ 0.55
PNKP-201ENST00000322344 SEC14L6B5MCN3 397 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 IGHV1-46P01743 117 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 OPN1MWP04001 364 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 OPN1MW2P0DN77 364 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 OPN1MW3P0DN78 364 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 CDC34P49427 236 aaPredicted RBP18.47■□□□□ 0.55
PNKP-201ENST00000322344 THBS3P49746 956 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 TMEM249Q2WGJ8 235 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 TMPRSS5Q9H3S3 457 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 TMEM140Q9NV12 185 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 USF3Q68DE3 2245 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 TRGV8A0A0C4DH27 118 aa18.46■□□□□ 0.55
PNKP-201ENST00000322344 CD40P25942 277 aa18.46■□□□□ 0.55
PNKP-201ENST00000322344 TLE1Q04724 770 aa18.46■□□□□ 0.55
PNKP-201ENST00000322344 FAM210BQ96KR6 192 aa18.46■□□□□ 0.55
PNKP-201ENST00000322344 PRR14LQ5THK1 2151 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 SMCO3A2RU48 225 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 HMGB3O15347 200 aaKnown RBP18.45■□□□□ 0.54
PNKP-201ENST00000322344 SLC31A2O15432 143 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 TMPRSS3P57727 454 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 CT45A1Q5HYN5 189 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 Q8N7P7 452 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 NUP37Q8NFH4 326 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 CT45A3Q8NHU0 189 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 RAB1CQ92928 201 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 HEATR1Q9H583 2144 aaKnown RBP18.45■□□□□ 0.54
PNKP-201ENST00000322344 HOXA5P20719 270 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 FAM27E3Q08E93 113 aa18.45■□□□□ 0.54
PNKP-201ENST00000322344 TRBV24-1A0A075B6N3 115 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 ZNF729A6NN14 1252 aaPredicted RBP18.44■□□□□ 0.54
PNKP-201ENST00000322344 KLK10O43240 276 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 SELLP14151 372 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 TCF15Q12870 199 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 FAM201AQ5SY85 155 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 GAFA1Q96PS6 74 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 LINC00574Q9H8X3 128 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 TCF19Q9Y242 345 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 TM4SF5O14894 197 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 GFRA3O60609 400 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 OPRK1P41145 380 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 VKORC1L1Q8N0U8 176 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 OR4F5Q8NH21 305 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 OR4F4Q96R69 305 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 IDI2-AS1Q9NZ38 188 aa18.44■□□□□ 0.54
PNKP-201ENST00000322344 CACNA1DQ01668 2161 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 ZNF318Q5VUA4 2279 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 SAA2-SAA4A0A096LPE2 208 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 C15orf61A6NNL5 157 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 K7EM74 188 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 IGHV3-7P01780 117 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 SAA2P0DJI9 122 aaPredicted RBP18.43■□□□□ 0.54
PNKP-201ENST00000322344 IRF2P14316 349 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 ADIRFQ15847 76 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 BSXQ3C1V8 233 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 ZNF788Q6ZQV5 615 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 CORO2AQ92828 525 aa18.43■□□□□ 0.54
PNKP-201ENST00000322344 NEIL1Q96FI4 390 aaPredicted RBP18.43■□□□□ 0.54
PNKP-201ENST00000322344 PRSS46E5RG02 174 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 MRPS11P82912 194 aaKnown RBP18.42■□□□□ 0.54
PNKP-201ENST00000322344 ZNF439Q8NDP4 499 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 NANPQ8TBE9 248 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 RPUSD4Q96CM3 377 aaKnown RBP18.42■□□□□ 0.54
PNKP-201ENST00000322344 PARLQ9H300 379 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 KCNIP2Q9NS61 270 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 FOXA2Q9Y261 457 aaPredicted RBP18.42■□□□□ 0.54
PNKP-201ENST00000322344 CLN5O75503 358 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 BMP5P22003 454 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 TEX36Q5VZQ5 186 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 TMEM108Q6UXF1 575 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 TREML4Q6UXN2 200 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 SLC16A13Q7RTY0 426 aa18.42■□□□□ 0.54
PNKP-201ENST00000322344 TRAV3A0A0B4J244 114 aa18.41■□□□□ 0.54
PNKP-201ENST00000322344 RRHO14718 337 aa18.41■□□□□ 0.54
PNKP-201ENST00000322344 PAGE4O60829 102 aa18.41■□□□□ 0.54
PNKP-201ENST00000322344 CDX1P47902 265 aaPredicted RBP18.41■□□□□ 0.54
PNKP-201ENST00000322344 RPL23P62829 140 aaKnown RBP18.41■□□□□ 0.54
PNKP-201ENST00000322344 POU2AF1Q16633 256 aa18.41■□□□□ 0.54
PNKP-201ENST00000322344 C1orf229Q6ZS94 237 aaPredicted RBP18.41■□□□□ 0.54
PNKP-201ENST00000322344 LEAP2Q969E1 77 aa18.41■□□□□ 0.54
PNKP-201ENST00000322344 ELOVL5Q9NYP7 299 aa18.41■□□□□ 0.54
PNKP-201ENST00000322344 DOK5Q9P104 306 aa18.41■□□□□ 0.54
PNKP-201ENST00000322344 MKRN2OSH3BPM6 223 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 NDUFA6P56556 154 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 NCMAPQ5T1S8 102 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 TCF23Q7RTU1 214 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 GATAD1Q8WUU5 269 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 RHOVQ96L33 236 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 A0A1W2PPV4 95 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 VENTXO95231 258 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 HRASP01112 189 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 TRGC2P03986 189 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 HSPE1P61604 102 aaKnown RBP18.4■□□□□ 0.54
PNKP-201ENST00000322344 LYG1Q8N1E2 194 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 DEFB108BQ8NET1 73 aa18.4■□□□□ 0.54
PNKP-201ENST00000322344 CCL13Q99616 98 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms