RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 SP7Q8TDD2 431 aaPredicted RBP17.93■□□□□ 0.46
KDM3B-201ENST00000314358 CHRNA10Q9GZZ6 450 aa17.93■□□□□ 0.46
KDM3B-201ENST00000314358 ASAH2BP0C7U1 165 aa17.93■□□□□ 0.46
KDM3B-201ENST00000314358 SMIM13P0DJ93 91 aa17.93■□□□□ 0.46
KDM3B-201ENST00000314358 JOSD1Q15040 202 aaPredicted RBP17.93■□□□□ 0.46
KDM3B-201ENST00000314358 FAM27BQ5VT28 67 aa17.93■□□□□ 0.46
KDM3B-201ENST00000314358 ZNF818PQ6ZRF7 136 aa17.93■□□□□ 0.46
KDM3B-201ENST00000314358 MARCH11A6NNE9 402 aa17.93■□□□□ 0.46
KDM3B-201ENST00000314358 ITLN2Q8WWU7 325 aaPredicted RBP17.93■□□□□ 0.46
KDM3B-201ENST00000314358 PIMREGQ9BSJ6 248 aa17.93■□□□□ 0.46
KDM3B-201ENST00000314358 LINC00305Q7Z4B0 112 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 GCSAMQ8N6F7 178 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 MARS2Q96GW9 593 aaKnown RBP17.92■□□□□ 0.46
KDM3B-201ENST00000314358 DUSP15Q9H1R2 295 aaPredicted RBP17.92■□□□□ 0.46
KDM3B-201ENST00000314358 PCP4P48539 62 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 SFRP2Q96HF1 295 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 IMMP2LQ96T52 175 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 NDUFA3O95167 84 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 MMD2Q8IY49 270 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 TNFRSF9Q07011 255 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 MT-ND6P03923 174 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 C8orf88P0DMB2 117 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 ERGP11308 486 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 ATP5J2P56134 94 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 MESP2Q0VG99 397 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 LEMD1Q68G75 181 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 AQP10Q96PS8 301 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 KIR2DL4Q99706 377 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 RPL39P5Q59GN2 51 aa17.92■□□□□ 0.46
KDM3B-201ENST00000314358 LOC101059948A0A1B0GTJ6 334 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 A1L4Q6 167 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 CDCP2Q5VXM1 449 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 MAP1BP46821 2468 aaKnown RBP17.91■□□□□ 0.46
KDM3B-201ENST00000314358 ODAMA1E959 279 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 ACSF3Q4G176 576 aaPredicted RBP17.91■□□□□ 0.46
KDM3B-201ENST00000314358 ZNF815PA8K554 130 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 SLC17A3O00476 420 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 LINC01560Q8TB33 94 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 TMEM70Q9BUB7 260 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 APOMO95445 188 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 C1QAP02745 245 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 SAA1P0DJI8 122 aaPredicted RBP17.91■□□□□ 0.46
KDM3B-201ENST00000314358 ICAM4Q14773 271 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 Q5BKY6 102 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 CENPWQ5EE01 88 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 SLC22A18ASQ8N1D0 253 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 SELENOKQ9Y6D0 94 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 C17orf51A8MQB3 221 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 HOXD4P09016 255 aaPredicted RBP17.91■□□□□ 0.46
KDM3B-201ENST00000314358 ISXQ2M1V0 245 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 BEND2Q8NDZ0 799 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 DNASE2BQ8WZ79 361 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 NPFFR1Q9GZQ6 430 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 TUBA4BQ9H853 241 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 SMCHD1A6NHR9 2005 aa17.91■□□□□ 0.46
KDM3B-201ENST00000314358 GFRA3O60609 400 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 CEACAM4O75871 244 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 RNASEH2CQ8TDP1 164 aaKnown RBP17.9■□□□□ 0.46
KDM3B-201ENST00000314358 LOC105371242A0A075B767 164 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 EPOPA6NHQ4 379 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 OR51G1Q8NGK1 321 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 A0A1B0GV72 72 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 CTSBP07858 339 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 NPPCP23582 126 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 VAX1Q5SQQ9 334 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 TCF24Q7RTU0 167 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 SRXN1Q9BYN0 137 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 GPR132Q9UNW8 380 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 OR5AN1Q8NGI8 311 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 MIA3Q5JRA6 1907 aa17.9■□□□□ 0.46
KDM3B-201ENST00000314358 SCN2AQ99250 2005 aa17.89■□□□□ 0.46
KDM3B-201ENST00000314358 TRAV24A0A0B4J272 114 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 NABP2Q9BQ15 211 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 ICE1Q9Y2F5 2266 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 OTOFQ9HC10 1997 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 C1QTNF9BB2RNN3 333 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 ZNF501Q96CX3 271 aaPredicted RBP17.89■□□□□ 0.45
KDM3B-201ENST00000314358 PRSS53Q2L4Q9 553 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 GFI1BQ5VTD9 330 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 ZNRF1Q8ND25 227 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 CCL19Q99731 98 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 SPSB4Q96A44 273 aa17.89■□□□□ 0.45
KDM3B-201ENST00000314358 SELENOTP62341 195 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 SHISA5Q8N114 240 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 KLF14Q8TD94 323 aaPredicted RBP17.88■□□□□ 0.45
KDM3B-201ENST00000314358 PCSK4Q6UW60 755 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 C5orf66Q9H5L9 145 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 RPS11P62280 158 aaKnown RBP eCLIP17.88■□□□□ 0.45
KDM3B-201ENST00000314358 MARF1Q9Y4F3 1742 aaKnown RBP17.88■□□□□ 0.45
KDM3B-201ENST00000314358 C10orf128Q5T292 105 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 WDR82Q6UXN9 313 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 TRBV5-3A0A0A0MS03 114 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 CDX1P47902 265 aaPredicted RBP17.88■□□□□ 0.45
KDM3B-201ENST00000314358 FAM201AQ5SY85 155 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 C8orf82Q6P1X6 216 aaPredicted RBP17.88■□□□□ 0.45
KDM3B-201ENST00000314358 GLMPQ8WWB7 406 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 PPP1R3EQ9H7J1 279 aa17.88■□□□□ 0.45
KDM3B-201ENST00000314358 ERVH48-1M5A8F1 160 aa17.87■□□□□ 0.45
KDM3B-201ENST00000314358 DMRTA1Q5VZB9 504 aa17.87■□□□□ 0.45
KDM3B-201ENST00000314358 WDR54Q9H977 334 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms