RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 HEXA-AS1Q9H8Q6 139 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 PLSCR2Q9NRY7 297 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 RELBQ01201 579 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 EGR4Q05215 589 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 ZNF430Q9H8G1 570 aaPredicted RBP11.3□□□□□ -0.6
SNED1-201ENST00000310397 TRAV14DV4A0A0A6YYC5 116 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 FBLL1A6NHQ2 334 aaKnown RBP11.3□□□□□ -0.6
SNED1-201ENST00000310397 RPS20P60866 119 aaKnown RBP11.3□□□□□ -0.6
SNED1-201ENST00000310397 HSPE1P61604 102 aaKnown RBP11.3□□□□□ -0.6
SNED1-201ENST00000310397 IGLV3-21P80748 117 aaPredicted RBP11.3□□□□□ -0.6
SNED1-201ENST00000310397 C10orf128Q5T292 105 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 CCL4P13236 92 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 LINC00469Q8N7U9 141 aa11.3□□□□□ -0.6
SNED1-201ENST00000310397 TMEM229AB2RXF0 380 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 ZNF714Q96N38 554 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 A0A1B0GTI1 187 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 GCSHP23434 173 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 MMD2Q8IY49 270 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 HSPB7Q9UBY9 170 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 ZDHHC8Q9ULC8 765 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 TMEM177Q53S58 311 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 TCF24Q7RTU0 167 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 SMRP1Q8NCR6 262 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 SP7Q8TDD2 431 aaPredicted RBP11.29□□□□□ -0.6
SNED1-201ENST00000310397 A0A1B0GV90 55 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 ODAMA1E959 279 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 WDR31Q8NA23 367 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 F8VVB4 439 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 F8VWA3 439 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 MSGN1A6NI15 193 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 FAM157AC9JC47 383 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 SRP19P09132 144 aaKnown RBP11.29□□□□□ -0.6
SNED1-201ENST00000310397 OR10S1Q8NGN2 331 aa11.29□□□□□ -0.6
SNED1-201ENST00000310397 ARHGAP21Q5T5U3 1957 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 UBE2CO00762 179 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 IGKV3-11P04433 115 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 OR1N2Q8NGR9 330 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 PEF1Q9UBV8 284 aaKnown RBP11.28□□□□□ -0.6
SNED1-201ENST00000310397 PLXNB1O43157 2135 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 IGHV1-45A0A0A0MS14 117 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 IL9P15248 144 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 UCP1P25874 307 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 RPL27AP46776 148 aaKnown RBP11.28□□□□□ -0.6
SNED1-201ENST00000310397 MAP1LC3AQ9H492 121 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 MAS1LP35410 378 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 GPX4P36969 197 aaPredicted RBP11.28□□□□□ -0.6
SNED1-201ENST00000310397 ZNF146Q15072 292 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 DCAF10Q5QP82 559 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 IGHV3OR15-7A0A075B7D8 119 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 BIVMQ86UB2 503 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 ZCCHC14Q8WYQ9 949 aaKnown RBP11.28□□□□□ -0.6
SNED1-201ENST00000310397 ARFGEF3Q5TH69 2177 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 SPINK2P20155 84 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 TGIF1Q15583 401 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 TTTY12Q9BZ98 90 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 AUP1Q9Y679 476 aa11.28□□□□□ -0.6
SNED1-201ENST00000310397 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.6
SNED1-201ENST00000310397 C3AR1Q16581 482 aa11.27□□□□□ -0.6
SNED1-201ENST00000310397 RND1Q92730 232 aa11.27□□□□□ -0.6
SNED1-201ENST00000310397 TNS1Q9HBL0 1735 aaKnown RBP11.27□□□□□ -0.6
SNED1-201ENST00000310397 J3QRE1 110 aa11.27□□□□□ -0.6
SNED1-201ENST00000310397 OR4C13Q8NGP0 309 aa11.27□□□□□ -0.6
SNED1-201ENST00000310397 TNFRSF19Q9NS68 423 aa11.27□□□□□ -0.6
SNED1-201ENST00000310397 NCOA6Q14686 2063 aaPredicted RBP11.27□□□□□ -0.6
SNED1-201ENST00000310397 J3QW42 95 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 LIPFP07098 398 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 COX6CP09669 75 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 PSMG4Q5JS54 123 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 RTBDNQ9BSG5 229 aaPredicted RBP11.27□□□□□ -0.61
SNED1-201ENST00000310397 NPIPB7O75200 414 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 IZUMO4Q1ZYL8 232 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 LINC00114Q6XXX2 140 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 ZNF600Q6ZNG1 722 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 OR2I1PQ8NGU4 316 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 ZG16O60844 167 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 CBLN1P23435 193 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 ERVFRD-1P60508 538 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 CTAG1AP78358 180 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 LTBP1Q14766 1721 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 CENPWQ5EE01 88 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 HES3Q5TGS1 186 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 GRIFINA4D1Z8 144 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 IGFBP3P17936 291 aaPredicted RBP11.27□□□□□ -0.61
SNED1-201ENST00000310397 MMDQ15546 238 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 SFTPA2Q8IWL1 248 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 ZNF784Q8NCA9 323 aaPredicted RBP11.27□□□□□ -0.61
SNED1-201ENST00000310397 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 PGPA6NDG6 321 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 AGFG2O95081 481 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 CRYBB3P26998 211 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 KCNMB1Q16558 191 aa11.27□□□□□ -0.61
SNED1-201ENST00000310397 CLDND2Q8NHS1 167 aa11.26□□□□□ -0.61
SNED1-201ENST00000310397 FBLN5Q9UBX5 448 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms