RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 EFNB2P52799 333 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 OR2B8PP59922 312 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CD81P60033 236 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 FGF12P61328 243 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 SEC61A1P61619 476 aaKnown RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 ZNF616Q08AN1 781 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 RSU1Q15404 277 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 NHLRC3Q5JS37 347 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 SAMD13Q5VXD3 122 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 TMEM268Q5VZI3 342 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 PLET1Q6UQ28 207 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 MRPL52Q86TS9 123 aaKnown RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 SMIM20Q8N5G0 67 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CD177Q8N6Q3 437 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 OR8B3Q8NGG8 313 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 OR51T1Q8NGJ9 327 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CXorf58Q96LI9 332 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 KCTD7Q96MP8 289 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 GAFA1Q96PS6 74 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 OR8B2Q96RD0 313 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 CCL13Q99616 98 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 SLC6A7Q99884 636 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 SSBP3Q9BWW4 388 aaPredicted RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 EXOSC4Q9NPD3 245 aaKnown RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 AK6Q9Y3D8 172 aaKnown RBP6.76□□□□□ -1.33
CHD6-201ENST00000309279 PEX16Q9Y5Y5 336 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 V9GY05 133 aa6.76□□□□□ -1.33
CHD6-201ENST00000309279 SONP18583 2426 aaKnown RBP6.75□□□□□ -1.33
CHD6-201ENST00000309279 HIVEP2P31629 2446 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 NIPBLQ6KC79 2804 aaeCLIP6.75□□□□□ -1.331e-5■■■■□ 22.3
CHD6-201ENST00000309279 MXRA5Q9NR99 2828 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 ZFHX3Q15911 3703 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DSCAML1Q8TD84 2053 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 A0A1B0GW55 424 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 SLC17A2O00624 439 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DVL1O14640 695 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 PDCD5O14737 125 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 XRCC3O43542 346 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 CD5LO43866 347 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 ZNF737O75373 536 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 FOXH1O75593 365 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 VENTXO95231 258 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 MSMBP08118 114 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DUX4L2P0CJ85 424 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DUX4L3P0CJ86 424 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DUX4L4P0CJ87 422 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DUX4L5P0CJ88 424 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DUX4L6P0CJ89 424 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DUX4L7P0CJ90 424 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 OMGP23515 440 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 MYL9P24844 172 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 LMO1P25800 156 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DDTP30046 118 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 CAV3P56539 151 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DUX4L9Q6RFH8 374 aaPredicted RBP6.75□□□□□ -1.33
CHD6-201ENST00000309279 GLIPR1L1Q6UWM5 242 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 NOXA1Q86UR1 476 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 ZNRF1Q8ND25 227 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 MRPS24Q96EL2 167 aaKnown RBP6.75□□□□□ -1.33
CHD6-201ENST00000309279 S100A13Q99584 98 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 SMR3AQ99954 134 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 FUNDC2Q9BWH2 189 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 ARL6Q9H0F7 186 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 FAM234AQ9H0X4 552 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 IL36RNQ9UBH0 155 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 DUX4Q9UBX2 424 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 ING4Q9UNL4 249 aa6.75□□□□□ -1.33
CHD6-201ENST00000309279 LINC00862A6NCI5 91 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 IFITM5A6NNB3 132 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 K7N7A8 449 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 PHF1O43189 567 aaPredicted RBP6.74□□□□□ -1.33
CHD6-201ENST00000309279 NDUFB3O43676 98 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 LY6G6DO95868 133 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 HAND1O96004 215 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 TFF1P04155 84 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 UBBP0CG47 229 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 RAB3BP20337 219 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 F2RP25116 425 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 GABRA2P47869 451 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 DVL1P1P54792 670 aaPredicted RBP6.74□□□□□ -1.33
CHD6-201ENST00000309279 GNB2P62879 340 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 QRFPP83859 136 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 LRRC10Q5BKY1 277 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 SOHLH1Q5JUK2 328 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 ACTL10Q5JWF8 245 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 AWAT2Q6E213 333 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 Q6P435 159 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 NR2C2APQ86WQ0 139 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 OSR2Q8N2R0 312 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 FAM216BQ8N7L0 139 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 ZNF383Q8NA42 475 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 OR6M1Q8NGM8 313 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 OR1P1Q8NH06 330 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 SHARPINQ9H0F6 387 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 RNF167Q9H6Y7 350 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 ELL3Q9HB65 397 aaPredicted RBP6.74□□□□□ -1.33
CHD6-201ENST00000309279 ST3GAL6Q9Y274 331 aa6.74□□□□□ -1.33
CHD6-201ENST00000309279 A0A0G2JK05 382 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 A0A1W2PP11 408 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 IGSF23A1L1A6 192 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms