RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 HIPK2Q9H2X6 1198 aa12.42□□□□□ -0.42
RUNX3-201ENST00000308873 TP53TG5Q9Y2B4 290 aa12.42□□□□□ -0.42
RUNX3-201ENST00000308873 TNCP24821 2201 aa12.42□□□□□ -0.42
RUNX3-201ENST00000308873 IGHV3OR15-7A0A075B7D8 119 aa12.42□□□□□ -0.42
RUNX3-201ENST00000308873 LINC01551Q86U37 167 aa12.42□□□□□ -0.42
RUNX3-201ENST00000308873 SNHG12Q9BXW3 62 aa12.42□□□□□ -0.42
RUNX3-201ENST00000308873 TIMM8BQ9Y5J9 83 aaPredicted RBP12.42□□□□□ -0.42
RUNX3-201ENST00000308873 ADMP35318 185 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 MPV17P39210 176 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 TMEM164Q5U3C3 297 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 DBX2Q6ZNG2 339 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 OR10G8Q8NGN5 311 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 OR13A1Q8NGR1 328 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 IL18BPO95998 194 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 CRISP2P16562 243 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 TDRG1Q3Y452 100 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 CISD2Q8N5K1 135 aaKnown RBP12.41□□□□□ -0.42
RUNX3-201ENST00000308873 FAM122AQ96E09 287 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 CIB3Q96Q77 187 aaPredicted RBP12.41□□□□□ -0.42
RUNX3-201ENST00000308873 CD82P27701 267 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 PSG7Q13046 419 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 FXYD3Q14802 87 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 RPL39P5Q59GN2 51 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 OR4P4Q8NGL7 312 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 ENY2Q9NPA8 101 aa12.41□□□□□ -0.42
RUNX3-201ENST00000308873 RBFOX2O43251 390 aaKnown RBP eCLIP12.4□□□□□ -0.42
RUNX3-201ENST00000308873 IGHEP01854 428 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 KRTAP27-1Q3LI81 207 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 FBXW9Q5XUX1 488 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 SFRP2Q96HF1 295 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 PLEKHA3Q9HB20 300 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 HSPB7Q9UBY9 170 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 COL5A1P20908 1838 aaPredicted RBP12.4□□□□□ -0.42
RUNX3-201ENST00000308873 NCKAP5O14513 1909 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 PTPRZ1P23471 2315 aaPredicted RBP12.4□□□□□ -0.42
RUNX3-201ENST00000308873 SNURFLB1AK76 121 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 SPINT2O43291 252 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 ATP6V1FQ16864 119 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 PXMP4Q9Y6I8 212 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.4□□□□□ -0.42
RUNX3-201ENST00000308873 RRHO14718 337 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 CER1O95813 267 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 OR9G9P0C7N8 305 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 Q8NFD4 153 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 TRIB1Q96RU8 372 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 STRADBQ9C0K7 418 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 FOXJ2Q9P0K8 574 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 PLCE1Q9P212 2302 aa12.4□□□□□ -0.42
RUNX3-201ENST00000308873 BOD1L1Q8NFC6 3051 aa12.4□□□□□ -0.43
RUNX3-201ENST00000308873 OR7C2O60412 319 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 ACTL10Q5JWF8 245 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 LINC00596Q86U02 117 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 TMEM45BQ96B21 275 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 PKIBQ9C010 78 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 CCKARP32238 428 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 TFPI2P48307 235 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 TGIF2LYQ8IUE0 185 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 NHLRC2Q8NBF2 726 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 OCC1Q8TAD7 63 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 IER2Q9BTL4 223 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 LRFN3Q9BTN0 628 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 NAT8BQ9UHF3 227 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 TRAV3A0A0B4J244 114 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 OR10J4P0C629 311 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 FRMD6-AS1P0C7T7 363 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 SPCS3P61009 180 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 HES3Q5TGS1 186 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 SPATA31B1PQ5VZV4 182 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 MRPL54Q6P161 138 aaKnown RBP12.39□□□□□ -0.43
RUNX3-201ENST00000308873 GBGT1Q8N5D6 347 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 FAM216AQ8WUB2 273 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 CACNA1HO95180 2353 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 ZFHX4Q86UP3 3567 aa12.39□□□□□ -0.43
RUNX3-201ENST00000308873 GATA2P23769 480 aaPredicted RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 SRP14P37108 136 aaKnown RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 NUTF2P61970 127 aaKnown RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 RPL31P62899 125 aaKnown RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 DCAF10Q5QP82 559 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 OR8I2Q8N0Y5 310 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 OR2Z1Q8NG97 314 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 OR1L6Q8NGR2 347 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 UHRF2Q96PU4 802 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 RIF1Q5UIP0 2472 aaKnown RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 OOEPA6NGQ2 149 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 HPRT1P00492 218 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 MYOD1P15172 320 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 Q8IYB0 196 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 ATOH7Q8N100 152 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 KLF14Q8TD94 323 aaPredicted RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 C2orf88Q9BSF0 95 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 VAMP8Q9BV40 100 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 MS4A5Q9H3V2 200 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 POLR3KQ9Y2Y1 108 aaPredicted RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 CEP192Q8TEP8 1941 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 NBASA2RRP1 2371 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 A8MXE2 369 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.38□□□□□ -0.43
RUNX3-201ENST00000308873 SERF1AO75920 110 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 DOLPP1Q86YN1 238 aa12.38□□□□□ -0.43
RUNX3-201ENST00000308873 LRRC29Q8WV35 223 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms