RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 RNASEH2CQ8TDP1 164 aaKnown RBP10.73□□□□□ -0.69
HIF3A-204ENST00000300862 QTRT1Q9BXR0 403 aaKnown RBP10.73□□□□□ -0.69
HIF3A-204ENST00000300862 DKK4Q9UBT3 224 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 TP53TG5Q9Y2B4 290 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 HCFC1P51610 2035 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 TRAV17A0A0B4J275 112 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 OPN1MWP04001 364 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 OPN1MW2P0DN77 364 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 OPN1MW3P0DN78 364 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 ZNF83P51522 516 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 WDR25Q64LD2 544 aaPredicted RBP10.73□□□□□ -0.69
HIF3A-204ENST00000300862 ZNRF1Q8ND25 227 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 OR10G9Q8NGN4 311 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 OR10G7Q8NGN6 311 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 PRR7Q8TB68 274 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 SARAFQ96BY9 339 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 STARD4Q96DR4 205 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 TMEM147Q9BVK8 224 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 ASCL3Q9NQ33 180 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 GNG12Q9UBI6 72 aa10.73□□□□□ -0.69
HIF3A-204ENST00000300862 IGKV1D-17A0A075B6S4 117 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 C15orf65H3BRN8 121 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 FCGR3BO75015 233 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 OR9G9P0C7N8 305 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 ADIRFQ15847 76 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 LBHQ53QV2 105 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-204ENST00000300862 FAM201AQ5SY85 155 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 NECAP1Q8NC96 275 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 OR10A7Q8NGE5 316 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 OR1P1Q8NH06 330 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 LEAP2Q969E1 77 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 NEU1Q99519 415 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 SMIM7Q9BQ49 75 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 NDUFAF3Q9BU61 184 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 PARD6AQ9NPB6 346 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 ZNF71Q9NQZ8 489 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-204ENST00000300862 EREGO14944 169 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 SPINT2O43291 252 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 MEF2BQ02080 365 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-204ENST00000300862 CLEC12BQ2HXU8 276 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 RPL39P5Q59GN2 51 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 GCSAMLQ5JQS6 135 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 SEM1Q6ZVN7 128 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 RPRMLQ8N4K4 120 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 RAB24Q969Q5 203 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 PLSCR4Q9NRQ2 329 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 RAB29O14966 203 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 IGLV1-44P01699 117 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 GPR12P47775 334 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 EDDM3BP56851 147 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 P2RY6Q15077 328 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 BHLHA15Q7RTS1 189 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-204ENST00000300862 R3HDM4Q96D70 268 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 LURAP1Q96LR2 239 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 NPCDR1Q9BY65 106 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 PARD6GQ9BYG4 376 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-204ENST00000300862 ACTR3CQ9C0K3 210 aaPredicted RBP10.72□□□□□ -0.69
HIF3A-204ENST00000300862 SRD5A3Q9H8P0 318 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 PROCRQ9UNN8 238 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 GAB2Q9UQC2 676 aa10.72□□□□□ -0.69
HIF3A-204ENST00000300862 IFNA1P01562 189 aa10.71□□□□□ -0.69
HIF3A-204ENST00000300862 USF2Q15853 346 aaPredicted RBP10.71□□□□□ -0.69
HIF3A-204ENST00000300862 C1orf162Q8NEQ5 155 aaPredicted RBP10.71□□□□□ -0.69
HIF3A-204ENST00000300862 ATMQ13315 3056 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 IFNL4K9M1U5 179 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 M0R1B8 84 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 M0R1X1 148 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 PFN1P07737 140 aaKnown RBP10.71□□□□□ -0.7
HIF3A-204ENST00000300862 ZNF134P52741 427 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 RTP5Q14D33 572 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 C16orf82Q7Z2V1 217 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 PIP4P1Q86T03 277 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 OR4F5Q8NH21 305 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 Q8TCH9 128 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 NOL4LQ96MY1 436 aaPredicted RBP10.71□□□□□ -0.7
HIF3A-204ENST00000300862 OR4F4Q96R69 305 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 P2RX4Q99571 388 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 HSD17B10Q99714 261 aaKnown RBP10.71□□□□□ -0.7
HIF3A-204ENST00000300862 PYGO2Q9BRQ0 406 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 CTDSP1Q9GZU7 261 aa10.71□□□□□ -0.7
HIF3A-204ENST00000300862 DMXL2Q8TDJ6 3036 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 PTPRBP23467 1997 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 TRAV3A0A0B4J244 114 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 SPRY3O43610 288 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 GZMHP20718 246 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 DUTP33316 252 aaKnown RBP10.7□□□□□ -0.7
HIF3A-204ENST00000300862 COA6Q5JTJ3 125 aaKnown RBP10.7□□□□□ -0.7
HIF3A-204ENST00000300862 MBNL2Q5VZF2 373 aaKnown RBP10.7□□□□□ -0.7
HIF3A-204ENST00000300862 IGFL2Q6UWQ7 119 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 ZNF66Q6ZN08 573 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 CENPVQ7Z7K6 275 aaPredicted RBP10.7□□□□□ -0.7
HIF3A-204ENST00000300862 MOGAT3Q86VF5 341 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 ZNF709Q8N972 641 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 LAMP3Q9UQV4 416 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 TIMM9Q9Y5J7 89 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 AKAP13Q12802 2813 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 DCHS1Q96JQ0 3298 aa10.7□□□□□ -0.7
HIF3A-204ENST00000300862 ADGRG4Q8IZF6 3080 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms