RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 MALSU1Q96EH3 234 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 HARBI1Q96MB7 349 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 AIFM2Q9BRQ8 373 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 COA4Q9NYJ1 87 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 IGHV1-69DA0A0B4J2H0 117 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 IGHV1-69P01742 117 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 PET100P0DJ07 73 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 S100A10P60903 97 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 RAB32Q13637 225 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 VKORC1L1Q8N0U8 176 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 OR1S1Q8NH92 325 aa16.73■□□□□ 0.27
PACSIN3-201ENST00000298838 TRAV14DV4A0A0A6YYC5 116 aa16.72■□□□□ 0.27
PACSIN3-201ENST00000298838 TIMM23O14925 209 aa16.72■□□□□ 0.27
PACSIN3-201ENST00000298838 POU2AF1Q16633 256 aa16.72■□□□□ 0.27
PACSIN3-201ENST00000298838 Q6ZRM9 215 aa16.72■□□□□ 0.27
PACSIN3-201ENST00000298838 RBMXL1Q96E39 390 aaKnown RBP16.72■□□□□ 0.27
PACSIN3-201ENST00000298838 ZFP57Q9NU63 452 aa16.72■□□□□ 0.27
PACSIN3-201ENST00000298838 TMEM140Q9NV12 185 aa16.72■□□□□ 0.27
PACSIN3-201ENST00000298838 FAM90A9PA6NNJ1 464 aa16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 PITX3O75364 302 aa16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 MBPP02686 304 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 NKX2-1P43699 371 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 ARHGDIBP52566 201 aa16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 NKX2-5P52952 324 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 CYB5R2Q6BCY4 276 aa16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 PIP4P2Q8N4L2 257 aa16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 OR11H4Q8NGC9 324 aa16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 THAP6Q8TBB0 222 aa16.71■□□□□ 0.27
PACSIN3-201ENST00000298838 ZANQ9Y493 2812 aa16.71■□□□□ 0.26
PACSIN3-201ENST00000298838 HABP2Q14520 560 aaPredicted RBP16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 C11orf87Q6NUJ2 197 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 FOXRED2Q8IWF2 684 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 C17orf50Q8WW18 174 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 MS4A7Q9GZW8 240 aaPredicted RBP16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 IGHV3OR16-10A0A075B7F0 116 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 FXYD6-FXYD2A0A087WZ82 144 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 ST8SIA3O43173 380 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 CD1BP29016 333 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 RPS16P62249 146 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 OR4A47Q6IF82 309 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 CIARTQ8N365 385 aaPredicted RBP16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 CFHR4Q92496 578 aa16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 LSM5Q9Y4Y9 91 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-201ENST00000298838 SRRM4A7MD48 611 aaKnown RBP16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 RBMXL2O75526 392 aaKnown RBP16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 IGHV4-38-2P0DP08 117 aa16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 CXorf66Q5JRM2 361 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 RUSC1-AS1Q66K80 236 aa16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 DYNAPQ8N1N2 210 aa16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 MBD2Q9UBB5 411 aa16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 POMT1Q9Y6A1 747 aa16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 SVEP1Q4LDE5 3571 aa16.69■□□□□ 0.26
PACSIN3-201ENST00000298838 ABCA1O95477 2261 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 K7EPK0 472 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 VENTXO95231 258 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 AVPP01185 164 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 RLN2P04090 185 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 SLC25A4P12235 298 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 PAX6P26367 422 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 LGALS7P47929 136 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 BRD3OSQ6XYD6 125 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 FAM71E2Q8N5Q1 922 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 GRPEL2Q8TAA5 225 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 AJUBAQ96IF1 538 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 FLNAP21333 2647 aaKnown RBP16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 SMAD7O15105 426 aaKnown RBP16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 NXPH3O95157 252 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 OR9G9P0C7N8 305 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 SAA1P0DJI8 122 aaPredicted RBP16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 ID3Q02535 119 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 PRSS54Q6PEW0 395 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 OR4A16Q8NH70 328 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 ITGB1BP2Q9UKP3 347 aa16.68■□□□□ 0.26
PACSIN3-201ENST00000298838 DEDDO75618 318 aa16.67■□□□□ 0.26
PACSIN3-201ENST00000298838 SNAPC5O75971 98 aa16.67■□□□□ 0.26
PACSIN3-201ENST00000298838 VSTM2AQ8TAG5 236 aa16.67■□□□□ 0.26
PACSIN3-201ENST00000298838 RNF126Q9BV68 326 aa16.67■□□□□ 0.26
PACSIN3-201ENST00000298838 BET1LQ9NYM9 111 aa16.67■□□□□ 0.26
PACSIN3-201ENST00000298838 NSG2Q9Y328 171 aa16.67■□□□□ 0.26
PACSIN3-201ENST00000298838 HMSDA8MTL9 139 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 FAM90A26D6RGX4 464 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 H0YIZ8 118 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 WRBO00258 174 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 ARPC5O15511 151 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 IGKV1D-33P01593 117 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 IGKV1-33P01594 117 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 VMA21Q3ZAQ7 101 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 KLF17Q5JT82 389 aaPredicted RBP16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 ZNF546Q86UE3 836 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 RNF5Q99942 180 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 OR5AC2Q9NZP5 309 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 RCL1Q9Y2P8 373 aaKnown RBP16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 NOTCH2Q04721 2471 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 IGLV2-23P01705 113 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 BRS3P32247 399 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 OR2B8PP59922 312 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 POLR2GP62487 172 aaKnown RBP eCLIP16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 RELBQ01201 579 aa16.66■□□□□ 0.26
PACSIN3-201ENST00000298838 PUSL1Q8N0Z8 303 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms