RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CLCF1Q9UBD9 225 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 CACNA1HO95180 2353 aa20.28■□□□□ 0.84
SPTSSA-201ENST00000298130 HCFC1P51610 2035 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 A0A0U1RQK1 487 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 A0A1B0GUS0 222 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 NDUFB4O95168 129 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 GPR12P47775 334 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 ATP6V1FQ16864 119 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 INO80CQ6PI98 192 aaPredicted RBP20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 ZNRF1Q8ND25 227 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 NEIL1Q96FI4 390 aaPredicted RBP20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 OR6C3Q9NZP0 311 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 MGAQ8IWI9 3026 aa20.27■□□□□ 0.84
SPTSSA-201ENST00000298130 TMEM250H0YL14 139 aa20.27■□□□□ 0.83
SPTSSA-201ENST00000298130 M0R1X1 148 aa20.27■□□□□ 0.83
SPTSSA-201ENST00000298130 GNB1P62873 340 aa20.27■□□□□ 0.83
SPTSSA-201ENST00000298130 FAM78BQ5VT40 261 aa20.27■□□□□ 0.83
SPTSSA-201ENST00000298130 C1QTNF9P0C862 333 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 SELLP14151 372 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 CD1BP29016 333 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 GNB2P62879 340 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 PRAMEF5Q5TYX0 476 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 TMEM183AQ8IXX5 376 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 OR1P1Q8NH06 330 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 OPN3Q9H1Y3 402 aaPredicted RBP20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 DMXL1Q9Y485 3027 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 ZNF705GA8MUZ8 300 aaPredicted RBP20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 ZNF134P52741 427 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 MSMPQ1L6U9 139 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 ROS1P08922 2347 aa20.26■□□□□ 0.83
SPTSSA-201ENST00000298130 HRASP01112 189 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 CD82P27701 267 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 PRDX2P32119 198 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 C1orf229Q6ZS94 237 aaPredicted RBP20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 SSMEM1Q8WWF3 244 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 TAAR6Q96RI8 345 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 C15orf65H3BRN8 121 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 IGKV3-15P01624 115 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 MBP02144 154 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 MIC13Q5XKP0 118 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 VHLLQ6RSH7 139 aa20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 HEYLQ9NQ87 328 aaPredicted RBP20.25■□□□□ 0.83
SPTSSA-201ENST00000298130 DUTP33316 252 aaKnown RBP20.24■□□□□ 0.83
SPTSSA-201ENST00000298130 SPINT2O43291 252 aa20.24■□□□□ 0.83
SPTSSA-201ENST00000298130 MYOD1P15172 320 aa20.24■□□□□ 0.83
SPTSSA-201ENST00000298130 GCH1P30793 250 aa20.24■□□□□ 0.83
SPTSSA-201ENST00000298130 SMIM21Q3B7S5 101 aa20.24■□□□□ 0.83
SPTSSA-201ENST00000298130 MANBALQ9NQG1 85 aa20.24■□□□□ 0.83
SPTSSA-201ENST00000298130 J3QW42 95 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 SLC31A2O15432 143 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 OR2T10Q8NGZ9 312 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 CIB3Q96Q77 187 aaPredicted RBP20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 PYGO2Q9BRQ0 406 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 MRPL37Q9BZE1 423 aaKnown RBP20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 A0A1W2PPV4 95 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 AQP7O14520 342 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 GZMBP10144 247 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 NUBP1P53384 320 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 ACOT6Q3I5F7 207 aaPredicted RBP20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 OR4A16Q8NH70 328 aa20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 HSD17B10Q99714 261 aaKnown RBP20.23■□□□□ 0.83
SPTSSA-201ENST00000298130 TTC28Q96AY4 2481 aa20.22■□□□□ 0.83
SPTSSA-201ENST00000298130 IGKV1D-17A0A075B6S4 117 aa20.22■□□□□ 0.83
SPTSSA-201ENST00000298130 A0A087X0M5 115 aa20.22■□□□□ 0.83
SPTSSA-201ENST00000298130 A0A1B0GX30 115 aa20.22■□□□□ 0.83
SPTSSA-201ENST00000298130 MS4A5Q9H3V2 200 aa20.22■□□□□ 0.83
SPTSSA-201ENST00000298130 A0A1B0GV90 55 aa20.22■□□□□ 0.83
SPTSSA-201ENST00000298130 C17orf112F2Z3M2 114 aa20.22■□□□□ 0.83
SPTSSA-201ENST00000298130 DDTP30046 118 aa20.22■□□□□ 0.83
SPTSSA-201ENST00000298130 GATCO43716 136 aaKnown RBP20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 ARL14EPLP0DKL9 152 aa20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 LINC01551Q86U37 167 aa20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 TET2Q6N021 2002 aaPredicted RBP20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 IGHV1-18A0A0C4DH31 117 aa20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 WT1P19544 449 aaPredicted RBP20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 VWC2Q2TAL6 325 aa20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 ZNF718Q3SXZ3 478 aa20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 DUX4L9Q6RFH8 374 aaPredicted RBP20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 TREML4Q6UXN2 200 aa20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 TCF23Q7RTU1 214 aa20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 WDR83OSQ9Y284 106 aa20.21■□□□□ 0.83
SPTSSA-201ENST00000298130 IGHV2OR16-5A0A0B4J2B6 119 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 TGOLN2O43493 480 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 PMS2P11Q13670 270 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 MORN2Q502X0 79 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 TMEM170AQ8WVE7 144 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 LURAP1Q96LR2 239 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 HINT2Q9BX68 163 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 ZNF320A2RRD8 509 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 RBFOX2O43251 390 aaKnown RBP eCLIP20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 THBS3P49746 956 aa20.2■□□□□ 0.82
SPTSSA-201ENST00000298130 TRBV20OR9-2A0A075B6H5 130 aa20.19■□□□□ 0.82
SPTSSA-201ENST00000298130 IL3RAP26951 378 aa20.19■□□□□ 0.82
SPTSSA-201ENST00000298130 SPATA31B1PQ5VZV4 182 aa20.19■□□□□ 0.82
SPTSSA-201ENST00000298130 FAM122AQ96E09 287 aa20.19■□□□□ 0.82
SPTSSA-201ENST00000298130 MGST2Q99735 147 aa20.19■□□□□ 0.82
SPTSSA-201ENST00000298130 RNF224P0DH78 156 aa20.19■□□□□ 0.82
SPTSSA-201ENST00000298130 ZNF83P51522 516 aa20.19■□□□□ 0.82
SPTSSA-201ENST00000298130 PLCE1Q9P212 2302 aa20.18■□□□□ 0.82
SPTSSA-201ENST00000298130 PDLIM3Q53GG5 364 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms