RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CLDND2Q8NHS1 167 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 DYNLRB1Q9NP97 96 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 SLC25A10Q9UBX3 287 aaPredicted RBP11.53□□□□□ -0.56
NXF1-201ENST00000294172 hADV38S2A0JD32 116 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 ZNF729A6NN14 1252 aaPredicted RBP11.53□□□□□ -0.56
NXF1-201ENST00000294172 PMS2P5A8MQ11 134 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 RBFOX2O43251 390 aaKnown RBP eCLIP11.53□□□□□ -0.56
NXF1-201ENST00000294172 SCAF4O95104 1147 aaKnown RBP11.53□□□□□ -0.56
NXF1-201ENST00000294172 HOXA1P49639 335 aaPredicted RBP11.53□□□□□ -0.56
NXF1-201ENST00000294172 ICAM4Q14773 271 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 SP5Q6BEB4 398 aaPredicted RBP11.53□□□□□ -0.56
NXF1-201ENST00000294172 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 SSX8Q7RTT4 187 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 SSX7Q7RTT5 188 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 PINX1Q96BK5 328 aaKnown RBP11.53□□□□□ -0.56
NXF1-201ENST00000294172 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
NXF1-201ENST00000294172 TMEM147Q9BVK8 224 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 SMDT1Q9H4I9 107 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 ZNRD1Q9P1U0 126 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 ZFP92A6NM28 416 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 E7EQL1 145 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 FGF7P21781 194 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 PLA2G5P39877 138 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 ATP6V1FQ16864 119 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 OR4S2Q8NH73 311 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 DDB2Q92466 427 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 HIST1H2BAQ96A08 127 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 PARD6GQ9BYG4 376 aaPredicted RBP11.52□□□□□ -0.57
NXF1-201ENST00000294172 TANC2Q9HCD6 1990 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 CHD8Q9HCK8 2581 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 SHISA9B4DS77 424 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 PPIAL4DF5H284 164 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 ITGB1BP1O14713 200 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 KIR2DS2P43631 304 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 RAB5BP61020 215 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.57
NXF1-201ENST00000294172 TFF3Q07654 80 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 C1orf87Q8N0U7 546 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 RNASE6Q93091 150 aaKnown RBP11.52□□□□□ -0.57
NXF1-201ENST00000294172 ZNF251Q9BRH9 671 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 HEYLQ9NQ87 328 aaPredicted RBP11.52□□□□□ -0.57
NXF1-201ENST00000294172 PPIAL4AQ9Y536 164 aa11.52□□□□□ -0.57
NXF1-201ENST00000294172 TRAV1-1A0A0B4J248 108 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 FAM90A27PA6NNH2 459 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 IFNA10P01566 189 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
NXF1-201ENST00000294172 CASP6P55212 293 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 SPCS3P61009 180 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 HABP2Q14520 560 aaPredicted RBP11.51□□□□□ -0.57
NXF1-201ENST00000294172 ZNF506Q5JVG8 444 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 ZNF383Q8NA42 475 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 ZNF439Q8NDP4 499 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 GAB2Q9UQC2 676 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 A0A1W2PPH5 198 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 C15orf62A8K5M9 175 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 C1orf196B1AJZ1 125 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 FOLR2P14207 255 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 PAX6P26367 422 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 THBS3P49746 956 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 RELBQ01201 579 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 NCMAPQ5T1S8 102 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 DMRTC2Q8IXT2 367 aaPredicted RBP11.51□□□□□ -0.57
NXF1-201ENST00000294172 KDF1Q8NAX2 398 aaPredicted RBP11.51□□□□□ -0.57
NXF1-201ENST00000294172 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.51□□□□□ -0.57
NXF1-201ENST00000294172 H1FXQ92522 213 aaKnown RBP11.51□□□□□ -0.57
NXF1-201ENST00000294172 CORO2AQ92828 525 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 HIPK2Q9H2X6 1198 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 TMEM106BQ9NUM4 274 aa11.51□□□□□ -0.57
NXF1-201ENST00000294172 RPUSD1Q9UJJ7 312 aaKnown RBP11.51□□□□□ -0.57
NXF1-201ENST00000294172 ANKHD1Q8IWZ3 2542 aaKnown RBP11.5□□□□□ -0.57
NXF1-201ENST00000294172 FAM90A9PA6NNJ1 464 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
NXF1-201ENST00000294172 IGKV1D-33P01593 117 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 IGKV1-33P01594 117 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 HSPB1P04792 205 aaKnown RBP11.5□□□□□ -0.57
NXF1-201ENST00000294172 ARG1P05089 322 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 CCL3L1P16619 93 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 GNB2P62879 340 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 ACSM6Q6P461 480 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 IQCF2Q8IXL9 164 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 LINC01560Q8TB33 94 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 RHOVQ96L33 236 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 TIMM9Q9Y5J7 89 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 LINC00312Q9Y6C7 94 aa11.5□□□□□ -0.57
NXF1-201ENST00000294172 MAP1LC3B2A6NCE7 125 aa11.49□□□□□ -0.57
NXF1-201ENST00000294172 MT-ND4LP03901 98 aa11.49□□□□□ -0.57
NXF1-201ENST00000294172 UCNP55089 124 aa11.49□□□□□ -0.57
NXF1-201ENST00000294172 LYPD2Q6UXB3 125 aa11.49□□□□□ -0.57
NXF1-201ENST00000294172 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
NXF1-201ENST00000294172 ZNF709Q8N972 641 aa11.49□□□□□ -0.57
NXF1-201ENST00000294172 NPCDR1Q9BY65 106 aa11.49□□□□□ -0.57
NXF1-201ENST00000294172 MAP1LC3BQ9GZQ8 125 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms