RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ATP1A1-AS1Q5TC04 95 aa10.88□□□□□ -0.67
PTCD1-201ENST00000292478 PDCD11Q14690 1871 aaKnown RBP10.88□□□□□ -0.67
PTCD1-201ENST00000292478 IFITM10A6NMD0 228 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 VENTXO95231 258 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 CCL1P22362 96 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 GCSHP23434 173 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 ZP1P60852 638 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 TWIST1Q15672 202 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 C1QL2Q7Z5L3 287 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 C16orf92Q96LL3 132 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 NEUROG3Q9Y4Z2 214 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 ARL14EPLP0DKL9 152 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 Q5BKY6 102 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 TRGC2P03986 189 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 RPLP1P05386 114 aaKnown RBP10.87□□□□□ -0.67
PTCD1-201ENST00000292478 PMCHL1Q16048 86 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 SYT8Q8NBV8 401 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 SS18L1O75177 396 aaPredicted RBP10.87□□□□□ -0.67
PTCD1-201ENST00000292478 KLK2P20151 261 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 C2orf68Q2NKX9 166 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 OR8A1Q8NGG7 326 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 VN1R17PQ8TDU5 208 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 SH3BGRL3Q9H299 93 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 TMEM56-RWDD3S4R434 201 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 PRR19A6NJB7 356 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 IQCF6A8MYZ5 107 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 J3QRE1 110 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 ZNHIT1O43257 154 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 AGAP20933 346 aa10.87□□□□□ -0.67
PTCD1-201ENST00000292478 COL25A1Q9BXS0 654 aaPredicted RBP10.87□□□□□ -0.67
PTCD1-201ENST00000292478 OTOFQ9HC10 1997 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 TMSB15BA0A087X1C1 80 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 MAS1LP35410 378 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 MEF2CQ06413 473 aaPredicted RBP10.86□□□□□ -0.67
PTCD1-201ENST00000292478 NABP2Q9BQ15 211 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 AP5S1Q9NUS5 200 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 NPIPB11E5RHQ5 1161 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 H0YL77 283 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 UMODP07911 640 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 ACAA1P09110 424 aaPredicted RBP10.86□□□□□ -0.67
PTCD1-201ENST00000292478 RARRES2Q99969 163 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 CECR9P0C854 216 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 CD40P25942 277 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 PDLIM4P50479 330 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 RTBDNQ9BSG5 229 aaPredicted RBP10.86□□□□□ -0.67
PTCD1-201ENST00000292478 PQLC2LA1A4F0 135 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 C12orf77C9JDV5 145 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 NPIPB7O75200 414 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 DLX1P56177 255 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 C1QTNF12Q5T7M4 302 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 RTN4RL2Q86UN3 420 aa10.86□□□□□ -0.67
PTCD1-201ENST00000292478 ZCCHC14Q8WYQ9 949 aaKnown RBP10.86□□□□□ -0.67
PTCD1-201ENST00000292478 FOXH1O75593 365 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 MPZP25189 248 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 SSTR5P35346 364 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 CA7P43166 264 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 MUC15Q8N387 334 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 GTF3AQ92664 365 aaKnown RBP10.85□□□□□ -0.67
PTCD1-201ENST00000292478 ZNF646O15015 1829 aaPredicted RBP10.85□□□□□ -0.67
PTCD1-201ENST00000292478 J3KRW8 73 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 TNFSF10P50591 281 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 ASCC3Q8N3C0 2202 aaKnown RBP10.85□□□□□ -0.67
PTCD1-201ENST00000292478 UNC13CQ8NB66 2214 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 CEACAM1P13688 526 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 NUBP1P53384 320 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
PTCD1-201ENST00000292478 FAM57AQ8TBR7 257 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 MRPL18Q9H0U6 180 aaKnown RBP10.85□□□□□ -0.67
PTCD1-201ENST00000292478 CARHSP1Q9Y2V2 147 aaKnown RBP10.85□□□□□ -0.67
PTCD1-201ENST00000292478 CKAP5Q14008 2032 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 CELA3AP09093 270 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 GCHFRP30047 84 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 FCGR2BP31994 310 aaPredicted RBP10.85□□□□□ -0.67
PTCD1-201ENST00000292478 FAM106AQ4KMX7 169 aa10.85□□□□□ -0.67
PTCD1-201ENST00000292478 IGKV3-7A0A075B6H7 116 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 WFDC3Q8IUB2 231 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 WDYHV1Q96HA8 205 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 PARLQ9H300 379 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 TMEM106BQ9NUM4 274 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 PF4V1P10720 104 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 GPHA2Q96T91 129 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 IGHV2OR16-5A0A0B4J2B6 119 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 PSMB2P49721 201 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 TM4SF20Q53R12 229 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 ZNF362Q5T0B9 420 aaPredicted RBP10.84□□□□□ -0.67
PTCD1-201ENST00000292478 ZNF738Q8NE65 137 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 LINC00271P0C7V0 271 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 SRSF9Q13242 221 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCD1-201ENST00000292478 NEU4Q8WWR8 484 aaPredicted RBP10.84□□□□□ -0.67
PTCD1-201ENST00000292478 HIST1H2BAQ96A08 127 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 EEF1AKMT3Q96AZ1 226 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 HSPB9Q9BQS6 159 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 DCAF16Q9NXF7 216 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 PAM16Q9Y3D7 125 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 KNTC1P50748 2209 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms