RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 MTCH2Q9Y6C9 303 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 LINC01553A4QN01 128 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 COX5BP10606 129 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 CENPVQ7Z7K6 275 aaPredicted RBP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 WNT5BQ9H1J7 359 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 TDGF1P3P51864 188 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 SRSF7Q16629 238 aaKnown RBP eCLIP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 OVOL2Q9BRP0 275 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 LOXL2Q9Y4K0 774 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 PRR32B1ATL7 298 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 LHBP01229 141 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 SRD5A2P31213 254 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 RPS4XP62701 263 aaKnown RBP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 TEPPQ6URK8 271 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 FAM159AQ6UWV7 190 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 ZNF562Q6V9R5 426 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 FLYWCH2Q96CP2 140 aaKnown RBP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 ALG14Q96F25 216 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 TNS1Q9HBL0 1735 aaKnown RBP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 VSIG8P0DPA2 414 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 H2BFSP57053 126 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 PMP22Q01453 160 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 TMIGD3P0DMS9 266 aaPredicted RBP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 ZFP36L2P47974 494 aaKnown RBP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 SRSF6Q13247 344 aaKnown RBP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 IGKV3D-15A0A087WSY6 115 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 LIPT2A6NK58 231 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 IGKV3-15P01624 115 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 ASAH2BP0C7U1 165 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 ATP6V0CP27449 155 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 HIST1H1AQ02539 215 aaPredicted RBP7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 ANKRD34AQ69YU3 496 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 NEUROG1Q92886 237 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 SLC25A38Q96DW6 304 aa7.3□□□□□ -1.24
CACNA1D-201ENST00000288139 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 DOK4Q8TEW6 326 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 GUCD1Q96NT3 240 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 SMOC1Q9H4F8 434 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 GP6Q9HCN6 339 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 CHST1O43916 411 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 B4GALT3O60512 393 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 TRGC2P03986 189 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 PSG9Q00887 426 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 ACANP16112 2415 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 PCP4P48539 62 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 TMEM95Q3KNT9 176 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 TMEM215Q68D42 235 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 FAM222BQ8WU58 562 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 SPTY2D1-AS1A0A0U1RR47 76 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 NDUFA2O43678 99 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 HLA-DRB1P01911 266 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 CKS1BP61024 79 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 POC1AQ8NBT0 407 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 HIGD1AQ9Y241 93 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 DEFB123Q8N688 67 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 PAXXQ9BUH6 204 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 J3QT63 122 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 NGFP01138 241 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 EMDP50402 254 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 VN1R4Q7Z5H5 301 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 APCDD1LQ8NCL9 501 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 GPR82Q96P67 336 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 SERGEFQ9UGK8 458 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 TBL2Q9Y4P3 447 aaKnown RBP7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 HCFC2Q9Y5Z7 792 aa7.29□□□□□ -1.24
CACNA1D-201ENST00000288139 LGALS1P09382 135 aaKnown RBP7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 HOXA5P20719 270 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 FAM78BQ5VT40 261 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 PSMB11A5LHX3 300 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 CEACAM4O75871 244 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 MT-CO3P00414 261 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 SEC11AP67812 179 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 GUCA2AQ02747 115 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 RNASEH2CQ8TDP1 164 aaKnown RBP7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 MMP23AO75900 390 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 PCDH15Q96QU1 1955 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 GCM2O75603 506 aaPredicted RBP7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 VSIG10L2P0DP72 767 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 TMEM252Q8N6L7 170 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 CCL19Q99731 98 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 QTRT1Q9BXR0 403 aaKnown RBP7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 ST20Q9HBF5 79 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 FHL5Q5TD97 284 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 LPAR5Q9H1C0 372 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 ZNF576Q9H609 170 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 JPT2Q9H910 190 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 SLC25A15Q9Y619 301 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 C19orf67A6NJJ6 358 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 GABRG2P18507 467 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 EFNB2P52799 333 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 TMEM258P61165 79 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 PRNTQ86SH4 94 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 MSL2Q9HCI7 577 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 AGAP20933 346 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 SMAD4Q13485 552 aaKnown RBP7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 LAIR2Q6ISS4 152 aa7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 C12orf76Q8N812 135 aaPredicted RBP7.28□□□□□ -1.24
CACNA1D-201ENST00000288139 LY96Q9Y6Y9 160 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms