RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PARLQ9H300 379 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 PLCE1Q9P212 2302 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 GCH1P30793 250 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 SSX2Q16385 188 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 ATP6V1FQ16864 119 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 ACOT6Q3I5F7 207 aaPredicted RBP15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 RNF212BA8MTL3 300 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 ZNF718Q3SXZ3 478 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 ACTL10Q5JWF8 245 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 PRR18Q8N4B5 295 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 SNRNP40Q96DI7 357 aaKnown RBP15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 KCNS2Q9ULS6 477 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 POLDIP2Q9Y2S7 368 aa15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 RBM7Q9Y580 266 aaKnown RBP15.28■□□□□ 0.04
PDLIM3-201ENST00000284767 CHD8Q9HCK8 2581 aa15.27■□□□□ 0.04
PDLIM3-201ENST00000284767 TYMSP04818 313 aa15.27■□□□□ 0.04
PDLIM3-201ENST00000284767 SELLP14151 372 aa15.27■□□□□ 0.04
PDLIM3-201ENST00000284767 ZNF16P17020 682 aaPredicted RBP15.27■□□□□ 0.04
PDLIM3-201ENST00000284767 SRP14P37108 136 aaKnown RBP15.27■□□□□ 0.04
PDLIM3-201ENST00000284767 MISP3Q96FF7 219 aa15.27■□□□□ 0.04
PDLIM3-201ENST00000284767 MSRB2Q9Y3D2 182 aa15.27■□□□□ 0.04
PDLIM3-201ENST00000284767 ATRXP46100 2492 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 ROS1P08922 2347 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 A0A0G2JNJ9 132 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 GGCTO75223 188 aaKnown RBP15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 VENTXO95231 258 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 RAB4BP61018 213 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 TIMM23BQ5SRD1 257 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 ACSM6Q6P461 480 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 DMRTC2Q8IXT2 367 aaPredicted RBP15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 PCGF1Q9BSM1 259 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 Q9UFV3 132 aa15.27■□□□□ 0.03
PDLIM3-201ENST00000284767 TNFRSF9Q07011 255 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 SPRNQ5BIV9 151 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 OR8G2PQ6IF36 304 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 GFRALQ6UXV0 394 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 TMEM18Q96B42 140 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 SFXN3Q9BWM7 321 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 RAXQ9Y2V3 346 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 A8MXE2 369 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 PSPNO60542 156 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 CLDN1O95832 211 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 KITLGP21583 273 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 FGFRL1Q8N441 504 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 OR2T10Q8NGZ9 312 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 OR4F5Q8NH21 305 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 OR4F4Q96R69 305 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 TMEM147Q9BVK8 224 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 SLC25A22Q9H936 323 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 HSPB7Q9UBY9 170 aa15.26■□□□□ 0.03
PDLIM3-201ENST00000284767 A0A1W2PPQ1 181 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 CCKARP32238 428 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 ZNF497Q6ZNH5 498 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 OR10G9Q8NGN4 311 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 OR10G7Q8NGN6 311 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 LURAP1Q96LR2 239 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 ELOVL1Q9BW60 279 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 PRRG2O14669 202 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 GYPAP02724 150 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 SPCS3P61009 180 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 WDR82Q6UXN9 313 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 DRAM1Q8N682 238 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 OR2Z1Q8NG97 314 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 OR6C3Q9NZP0 311 aa15.25■□□□□ 0.03
PDLIM3-201ENST00000284767 ZNF705GA8MUZ8 300 aaPredicted RBP15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 MBNL2Q5VZF2 373 aaKnown RBP15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 CXXC4Q9H2H0 198 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 TRAPPC2LQ9UL33 140 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 TMEM210A6NLX4 147 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 CACNA1DQ01668 2161 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 ZNF146Q15072 292 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 MSMO1Q15800 293 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 KCNIP4Q6PIL6 250 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 Q8IYB0 196 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 NEIL1Q96FI4 390 aaPredicted RBP15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 METRNQ9UJH8 293 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 FUT9Q9Y231 359 aa15.24■□□□□ 0.03
PDLIM3-201ENST00000284767 NBASA2RRP1 2371 aa15.23■□□□□ 0.03
PDLIM3-201ENST00000284767 HAND1O96004 215 aa15.23■□□□□ 0.03
PDLIM3-201ENST00000284767 LCN2P80188 198 aa15.23■□□□□ 0.03
PDLIM3-201ENST00000284767 USF2Q15853 346 aaPredicted RBP15.23■□□□□ 0.03
PDLIM3-201ENST00000284767 NCOR2Q9Y618 2525 aa15.23■□□□□ 0.03
PDLIM3-201ENST00000284767 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.23■□□□□ 0.03
PDLIM3-201ENST00000284767 CRYAAP02489 173 aa15.23■□□□□ 0.03
PDLIM3-201ENST00000284767 BTF3L4Q96K17 158 aa15.23■□□□□ 0.03
PDLIM3-201ENST00000284767 SH2D1BO14796 132 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 HMGB3O15347 200 aaKnown RBP15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 IQCJQ1A5X6 159 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 FFAR4Q5NUL3 377 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 FAM53AQ6NSI3 398 aaPredicted RBP15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 ZBTB34Q8NCN2 500 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 TMEM37Q8WXS4 190 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 HES4Q9HCC6 221 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 MBNL3Q9NUK0 354 aaKnown RBP15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 ZNF124Q15973 351 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 FAM169BQ8N8A8 192 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 MRPL37Q9BZE1 423 aaKnown RBP15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 WIPI2Q9Y4P8 454 aa15.22■□□□□ 0.03
PDLIM3-201ENST00000284767 P0C879 139 aa15.21■□□□□ 0.03
PDLIM3-201ENST00000284767 TPRX1Q8N7U7 411 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms