RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 SNRPCP09234 159 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 PAX6P26367 422 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 FFAR4Q5NUL3 377 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 AVPI1Q5T686 147 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 SPSB3Q6PJ21 355 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 GATAD1Q8WUU5 269 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 TAF15Q92804 592 aaKnown RBP eCLIP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 RPUSD4Q96CM3 377 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 RCC1LQ96I51 464 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 MAP1LC3BQ9GZQ8 125 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 AURKAIP1Q9NWT8 199 aaPredicted RBP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 IL19Q9UHD0 177 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 CARHSP1Q9Y2V2 147 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 TRAV38-1A0A0B4J264 116 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 NUDT19A8MXV4 375 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 TRIM77I1YAP6 450 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 ENSAO43768 121 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 TAGLN2P37802 199 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 CASP6P55212 293 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 LOXL3P58215 753 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 Q8TCH9 128 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 GAFA1Q96PS6 74 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 POLQO75417 2590 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 KBTBD11-OT1A0A1B0GTJ5 212 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 A0A1W2PRD5 423 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 A0A1W2PRF3 423 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 A0A1W2PRM7 423 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 NKX6-3A6NJ46 265 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 RRHO14718 337 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 IGKV1D-33P01593 117 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 IGKV1-33P01594 117 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 OR8U8P0C7N1 319 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 TUBG1P23258 451 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 NHLH1Q02575 133 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 DIAPH2-AS1Q14236 149 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 C17orf58Q2M2W7 97 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 ZNF343Q6P1L6 599 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 ZNF429Q86V71 674 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 OR10X1Q8NGY0 326 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 WDR61Q9GZS3 305 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 EGLN1Q9GZT9 426 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 TUBG2Q9NRH3 451 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 HSPB7Q9UBY9 170 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 JPT1Q9UK76 154 aa4.99□□□□□ -1.61
TNFSF4-201ENST00000281834 USP9YO00507 2555 aaPredicted RBP4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 PPIAL4EA0A075B759 164 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 VSTM5A8MXK1 200 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 PPIAL4DF5H284 164 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 H3BQ15 152 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 RD3LP0DJH9 198 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 PPIAL4FP0DN26 164 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 NQO2P16083 231 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ZNF726P1Q15940 193 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 CST9LP1Q5W188 147 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ACSM6Q6P461 480 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ZNF561Q8N587 486 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 RPP25LQ8N5L8 163 aaKnown RBP4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ZBTB34Q8NCN2 500 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ENY2Q9NPA8 101 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 CISD1Q9NZ45 108 aaKnown RBP4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 PPIAL4AQ9Y536 164 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 EPG5Q9HCE0 2579 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 E7EQL1 145 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ACTL6BO94805 426 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 SCAF4O95104 1147 aaKnown RBP4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 HPRT1P00492 218 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 MMP9P14780 707 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 MDKP21741 143 aaPredicted RBP4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 COX7A1P24310 79 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 HTD2P86397 168 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 CDSNQ15517 529 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 STUMQ69YW2 141 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ZNF66Q6ZN08 573 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 MOB3BQ86TA1 216 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ZNF383Q8NA42 475 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 NECAP1Q8NC96 275 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 LFNGQ8NES3 379 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 OR10G4Q8NGN3 311 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 OR10G9Q8NGN4 311 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 OR10G7Q8NGN6 311 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 CA5BP1Q8WTZ4 195 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 NIPSNAP3BQ9BS92 247 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 HIPK2Q9H2X6 1198 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 SMCO4Q9NRQ5 59 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 LRRK2Q5S007 2527 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 hADV38S2A0JD32 116 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 C1QTNF9BB2RNN3 333 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 FAM157AC9JC47 383 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 RAB29O14966 203 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 NDUFB3O43676 98 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 LHBP01229 141 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 ACAA1P09110 424 aaPredicted RBP4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 SLC25A6P12236 298 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 HNF1AP20823 631 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 RPS10P46783 165 aaKnown RBP4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 LRRC75BQ2VPJ9 315 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 PDLIM3Q53GG5 364 aaPredicted RBP4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 OR4A47Q6IF82 309 aa4.98□□□□□ -1.61
TNFSF4-201ENST00000281834 TCF23Q7RTU1 214 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms