RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 REG1BP48304 166 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 DIAPH2-AS1Q14236 149 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 HCP5Q6MZN7 132 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 RHOVQ96L33 236 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 AIFM2Q9BRQ8 373 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 MAGT1Q9H0U3 335 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 ABCA2Q9BZC7 2435 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 MAP1AP78559 2803 aaPredicted RBP11.44□□□□□ -0.58
SS18-201ENST00000269137 KANTRA0A1W2PQU2 76 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 ODF3BA8MYP8 253 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 FAM157AC9JC47 383 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 WRBO00258 174 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 TXNL1O43396 289 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 BCL2L11O43521 198 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 CHST1O43916 411 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 GAPDHP04406 335 aaKnown RBP11.44□□□□□ -0.58
SS18-201ENST00000269137 SLC25A16P16260 332 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 MC5RP33032 325 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 RAB14P61106 215 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 PRB3Q04118 309 aaPredicted RBP11.44□□□□□ -0.58
SS18-201ENST00000269137 TMEM177Q53S58 311 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 SLC51BQ86UW2 128 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 PDPNQ86YL7 162 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 OSR1Q8TAX0 266 aaPredicted RBP11.44□□□□□ -0.58
SS18-201ENST00000269137 RAB40CQ96S21 281 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 HSPB7Q9UBY9 170 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 APCP25054 2843 aa11.44□□□□□ -0.58
SS18-201ENST00000269137 SYNGR2O43760 224 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 SSSCA1O60232 199 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 IGKV1-16P04430 117 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 RAB13P51153 203 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 DVL1P1P54792 670 aaPredicted RBP11.43□□□□□ -0.58
SS18-201ENST00000269137 TNFRSF9Q07011 255 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 CLEC12BQ2HXU8 276 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 VMO1Q7Z5L0 202 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 LRRC75A-AS1Q8N1F1 130 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 LHX4Q969G2 390 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 TMEM140Q9NV12 185 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 CACFD1Q9UGQ2 172 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 WASHC3Q9Y3C0 194 aa11.43□□□□□ -0.58
SS18-201ENST00000269137 GPR137BO60478 399 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 MED6O75586 246 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 TMEM50AO95807 157 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 ARG1P05089 322 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 IL6RP08887 468 aaPredicted RBP11.42□□□□□ -0.58
SS18-201ENST00000269137 OR9G9P0C7N8 305 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 HTR1DP28221 377 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 VAMP2P63027 116 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 SSX9Q7RTT3 188 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 VKORC1L1Q8N0U8 176 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 OR2C3Q8N628 320 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 RPEQ96AT9 228 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 ARPC5LQ9BPX5 153 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 LYRM2Q9NU23 88 aaPredicted RBP11.42□□□□□ -0.58
SS18-201ENST00000269137 DPM3Q9P2X0 92 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 VPS13CQ709C8 3753 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 H7C2Y5 167 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 TAAR5O14804 337 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 NXPH3O95157 252 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 PAX9P55771 341 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 TAS2R30P59541 319 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 UBE2KP61086 200 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 RELBQ01201 579 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 DEFB113Q30KQ7 82 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 OR4A47Q6IF82 309 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 OR4C13Q8NGP0 309 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 FLYWCH2Q96CP2 140 aaKnown RBP11.42□□□□□ -0.58
SS18-201ENST00000269137 INSIG2Q9Y5U4 225 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 WSB1Q9Y6I7 421 aa11.42□□□□□ -0.58
SS18-201ENST00000269137 TNCP24821 2201 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 IGHV1-3A0A0C4DH29 117 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 SRRM4A7MD48 611 aaKnown RBP11.41□□□□□ -0.58
SS18-201ENST00000269137 RNASEK-C17orf49H0YIS7 233 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 SHOXO15266 292 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 TOX4O94842 621 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
SS18-201ENST00000269137 CEACAM3P40198 252 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 PAX8Q06710 450 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 KLRD1Q13241 179 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 PDLIM3Q53GG5 364 aaPredicted RBP11.41□□□□□ -0.58
SS18-201ENST00000269137 LDLRAD2Q5SZI1 272 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 ZNF429Q86V71 674 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 OR52E5Q8NH55 327 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 SCARB1Q8WTV0 552 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 PCNPQ8WW12 178 aaKnown RBP11.41□□□□□ -0.58
SS18-201ENST00000269137 MBD6Q96DN6 1003 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 SMIM8Q96KF7 97 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 TBX15Q96SF7 602 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 ZC4H2Q9NQZ6 224 aa11.41□□□□□ -0.58
SS18-201ENST00000269137 GCN1Q92616 2671 aaKnown RBP11.41□□□□□ -0.58
SS18-201ENST00000269137 RBMXL2O75526 392 aaKnown RBP11.4□□□□□ -0.58
SS18-201ENST00000269137 USF1P22415 310 aaPredicted RBP11.4□□□□□ -0.58
SS18-201ENST00000269137 RPL23AP62750 156 aaKnown RBP11.4□□□□□ -0.58
SS18-201ENST00000269137 MINOS1Q5TGZ0 78 aa11.4□□□□□ -0.58
SS18-201ENST00000269137 COMMD7Q86VX2 200 aa11.4□□□□□ -0.58
SS18-201ENST00000269137 HARBI1Q96MB7 349 aa11.4□□□□□ -0.58
SS18-201ENST00000269137 SLC25A31Q9H0C2 315 aa11.4□□□□□ -0.58
SS18-201ENST00000269137 CYTL1Q9NRR1 136 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms