RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 HOXA5P20719 270 aa9.68□□□□□ -0.86
CHFR-201ENST00000266880 MUC21Q5SSG8 566 aa9.68□□□□□ -0.86
CHFR-201ENST00000266880 TTC9CQ8N5M4 171 aa9.68□□□□□ -0.86
CHFR-201ENST00000266880 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
CHFR-201ENST00000266880 PATJQ8NI35 1801 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 PGPA6NDG6 321 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 PGFP49763 221 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
CHFR-201ENST00000266880 NEUROG1Q92886 237 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 SDHCQ99643 169 aaPredicted RBP9.67□□□□□ -0.86
CHFR-201ENST00000266880 CREBBPQ92793 2442 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 CRYBB3P26998 211 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 GOLT1AQ6ZVE7 132 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 HOXB3P14651 431 aaPredicted RBP9.67□□□□□ -0.86
CHFR-201ENST00000266880 LEPP41159 167 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 C1QL3Q5VWW1 255 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 CHST5Q9GZS9 411 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 TMEM250H0YL14 139 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 NKX2-8O15522 239 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 APOHP02749 345 aaPredicted RBP9.67□□□□□ -0.86
CHFR-201ENST00000266880 OCIAD2Q56VL3 154 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 K7N7A8 449 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 GREM1O60565 184 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 LINC00596Q86U02 117 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 MPC1Q9Y5U8 109 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 NFAM1Q8NET5 270 aaPredicted RBP9.67□□□□□ -0.86
CHFR-201ENST00000266880 ZNF714Q96N38 554 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 TET1Q8NFU7 2136 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 SPG11Q96JI7 2443 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 LINC01387J3KSC0 135 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 SMIM20Q8N5G0 67 aa9.67□□□□□ -0.86
CHFR-201ENST00000266880 ITGB1BP1O14713 200 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 CD3EP07766 207 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 RAB1CQ92928 201 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 PTPRDP23468 1912 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 ASAH2BP0C7U1 165 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 LAMTOR2Q9Y2Q5 125 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 UBE2V1Q13404 147 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 TMEM144Q7Z5S9 345 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 EDA2RQ9HAV5 297 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 GPR6P46095 362 aaPredicted RBP9.66□□□□□ -0.86
CHFR-201ENST00000266880 ZNF488Q96MN9 340 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 UBE2CO00762 179 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 SYNGR3O43761 229 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 SLC25A53Q5H9E4 307 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 MESTQ5EB52 335 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 C5orf30Q96GV9 206 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 TRAV8-1A0A0A6YYK1 113 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 LPAR2Q9HBW0 351 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 NRAPQ86VF7 1730 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 FOXI3A8MTJ6 420 aaPredicted RBP9.66□□□□□ -0.86
CHFR-201ENST00000266880 RPL27AP46776 148 aaKnown RBP9.66□□□□□ -0.86
CHFR-201ENST00000266880 C10orf111Q8N326 155 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 IGHV3-72A0A0B4J1Y9 119 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 RPS11P62280 158 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHFR-201ENST00000266880 TRA2AQ13595 282 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHFR-201ENST00000266880 PRSS41Q7RTY9 318 aa9.66□□□□□ -0.86
CHFR-201ENST00000266880 TAF15Q92804 592 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHFR-201ENST00000266880 SPSB4Q96A44 273 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 TOMM7Q9P0U1 55 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 SELENOKQ9Y6D0 94 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 H3BRM9 83 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 OR52M1Q8NGK5 317 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 VSIG8P0DPA2 414 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 SRSF5Q13243 272 aaKnown RBP9.65□□□□□ -0.86
CHFR-201ENST00000266880 C3AR1Q16581 482 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 MRPS18BQ9Y676 258 aaKnown RBP9.65□□□□□ -0.86
CHFR-201ENST00000266880 CLDN14O95500 239 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 PSG9Q00887 426 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 CXorf66Q5JRM2 361 aaPredicted RBP9.65□□□□□ -0.86
CHFR-201ENST00000266880 STPG3Q8N7X2 389 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 MYEOVQ96EZ4 313 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 WNK3Q9BYP7 1800 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 TANC2Q9HCD6 1990 aa9.65□□□□□ -0.86
CHFR-201ENST00000266880 RCC1LQ96I51 464 aaKnown RBP9.65□□□□□ -0.86
CHFR-201ENST00000266880 TRBV5-4A0A0C4DH59 114 aa9.65□□□□□ -0.87
CHFR-201ENST00000266880 SRSF6Q13247 344 aaKnown RBP9.65□□□□□ -0.87
CHFR-201ENST00000266880 ATXN7O15265 892 aaPredicted RBP9.65□□□□□ -0.87
CHFR-201ENST00000266880 CNTFRP26992 372 aa9.65□□□□□ -0.87
CHFR-201ENST00000266880 IGHV3-48P01763 117 aa9.65□□□□□ -0.87
CHFR-201ENST00000266880 ANKRD33Q7Z3H0 272 aa9.65□□□□□ -0.87
CHFR-201ENST00000266880 VKORC1L1Q8N0U8 176 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 GPHA2Q96T91 129 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 C9JCJ5 164 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 NKX2-2O95096 273 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 MRGPRX3Q96LB0 322 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 TMEM222Q9H0R3 208 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 BCORQ6W2J9 1755 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 CEACAM5P06731 702 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 PRR35P0CG20 571 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 ZNF585BQ52M93 769 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 HCFC1P51610 2035 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 C17orf51A8MQB3 221 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 GCHFRP30047 84 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 IRF3Q14653 427 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 SLC25A2Q9BXI2 301 aa9.64□□□□□ -0.87
CHFR-201ENST00000266880 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms