RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SLC39A9Q9NUM3 307 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 UQCC1Q9NVA1 299 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 KIAA1456Q9P272 454 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 AMMECR1Q9Y4X0 333 aaPredicted RBP7.68□□□□□ -1.18
SSR3-201ENST00000265044 IGKV1-5P01602 117 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 NMBP08949 121 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 PPOXP50336 477 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 PPT1P50897 306 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 ZNF134P52741 427 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 C17orf58Q2M2W7 97 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 ZNF585BQ52M93 769 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 NMSQ5H8A3 153 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 WDR25Q64LD2 544 aaPredicted RBP7.68□□□□□ -1.18
SSR3-201ENST00000265044 Q6ZRM9 215 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 LDLRAD3Q86YD5 345 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 MRPL20Q9BYC9 149 aaKnown RBP7.68□□□□□ -1.18
SSR3-201ENST00000265044 MS4A7Q9GZW8 240 aaPredicted RBP7.68□□□□□ -1.18
SSR3-201ENST00000265044 WSB1Q9Y6I7 421 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 IGSF23A1L1A6 192 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 F2RL2O00254 374 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 C1QL1O75973 258 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 FGF2P09038 288 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 DEFA4P12838 97 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 FGF7P21781 194 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 TLE4Q04727 773 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 OR4D5Q8NGN0 318 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 TMEM186Q96B77 213 aa7.68□□□□□ -1.18
SSR3-201ENST00000265044 QTRT1Q9BXR0 403 aaKnown RBP7.68□□□□□ -1.18
SSR3-201ENST00000265044 USP9XQ93008 2570 aaPredicted RBP7.68□□□□□ -1.18
SSR3-201ENST00000265044 M0R036 132 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 SLC25A17O43808 307 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 ID3Q02535 119 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 SSX2Q16385 188 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 TNXAQ16473 311 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 TMEM30BQ3MIR4 351 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 VSTM2AQ8TAG5 236 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 ATP5SQ99766 215 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 CTSZQ9UBR2 303 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 A6NNC1 897 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 C17orf112F2Z3M2 114 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 GAPDHP04406 335 aaKnown RBP7.67□□□□□ -1.18
SSR3-201ENST00000265044 ATP6V0CP27449 155 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 HTR1DP28221 377 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 C22orf15Q8WYQ4 148 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 TMEM133Q9H2Q1 129 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 IFI27L2Q9H2X8 130 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 OR51B2Q9Y5P1 312 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 DOPEY1Q5JWR5 2465 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 ABCA12Q86UK0 2595 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 HMGB3O15347 200 aaKnown RBP7.67□□□□□ -1.18
SSR3-201ENST00000265044 EFNA4P52798 201 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 SRSF4Q08170 494 aaKnown RBP7.67□□□□□ -1.18
SSR3-201ENST00000265044 ZNF525Q8N782 197 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 FKBP11Q9NYL4 201 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 CACFD1Q9UGQ2 172 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 PRNDQ9UKY0 176 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 FAM96BQ9Y3D0 163 aa7.67□□□□□ -1.18
SSR3-201ENST00000265044 PLXNB1O43157 2135 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 IGHV1-8P0DP01 117 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 PDLIM4P50479 330 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 MMDQ15546 238 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 TOR2AQ5JU69 321 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 OR4C13Q8NGP0 309 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 BSCL2Q96G97 398 aaPredicted RBP7.66□□□□□ -1.18
SSR3-201ENST00000265044 WASHC3Q9Y3C0 194 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 ZFP92A6NM28 416 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 SIAH2O43255 324 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 LOXP28300 417 aaPredicted RBP7.66□□□□□ -1.18
SSR3-201ENST00000265044 MC5RP33032 325 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 SUB1P53999 127 aaKnown RBP eCLIP7.66□□□□□ -1.183e-7■■■■□ 21.3
SSR3-201ENST00000265044 SPCS3P61009 180 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 AANATQ16613 207 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 MST1LQ2TV78 715 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 MIDNQ504T8 468 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 OR4A47Q6IF82 309 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.66□□□□□ -1.18
SSR3-201ENST00000265044 FAM168AQ92567 244 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 ACY3Q96HD9 319 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 RSG1Q9BU20 258 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 TCF19Q9Y242 345 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 LEUTXA8MZ59 168 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 FAM90A26D6RGX4 464 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 C19orf84I3L1E1 186 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 IGKV1-39P01597 117 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 IGKV1D-39P04432 117 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 MMP9P14780 707 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 LOXL3P58215 753 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 ARSJQ5FYB0 599 aaPredicted RBP7.66□□□□□ -1.18
SSR3-201ENST00000265044 SH3BGRL3Q9H299 93 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 ZNF355PQ9NSJ1 428 aa7.66□□□□□ -1.18
SSR3-201ENST00000265044 NUPL2O15504 423 aaKnown RBP7.65□□□□□ -1.18
SSR3-201ENST00000265044 OR9G9P0C7N8 305 aa7.65□□□□□ -1.18
SSR3-201ENST00000265044 OR13C7P0DN81 318 aa7.65□□□□□ -1.18
SSR3-201ENST00000265044 NPY1RP25929 384 aa7.65□□□□□ -1.18
SSR3-201ENST00000265044 HAGHQ16775 308 aa7.65□□□□□ -1.18
SSR3-201ENST00000265044 C9orf152Q5JTZ5 239 aa7.65□□□□□ -1.18
SSR3-201ENST00000265044 UBAC2Q8NBM4 344 aa7.65□□□□□ -1.18
SSR3-201ENST00000265044 AGMATQ9BSE5 352 aa7.65□□□□□ -1.18
SSR3-201ENST00000265044 BPESC1Q9GZL8 116 aa7.65□□□□□ -1.18
SSR3-201ENST00000265044 TSPAN4O14817 238 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms