RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 MPC2O95563 127 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 HRASP01112 189 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 IGHV1-69P01742 117 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 PAX6P26367 422 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 NKX2-5P52952 324 aaPredicted RBP18.28■□□□□ 0.52
UFD1-201ENST00000263202 ERVK-16P61578 105 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 POU2AF1Q16633 256 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 SSX9Q7RTT3 188 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 OR4C13Q8NGP0 309 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 SRRM4A7MD48 611 aaKnown RBP18.28■□□□□ 0.52
UFD1-201ENST00000263202 TIMM23O14925 209 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 CFHR4Q92496 578 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 MALSU1Q96EH3 234 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 RHOVQ96L33 236 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 IGHV3OR16-10A0A075B7F0 116 aa18.27■□□□□ 0.52
UFD1-201ENST00000263202 SHOXO15266 292 aa18.27■□□□□ 0.52
UFD1-201ENST00000263202 MBPP02686 304 aaPredicted RBP18.27■□□□□ 0.52
UFD1-201ENST00000263202 HABP2Q14520 560 aaPredicted RBP18.27■□□□□ 0.52
UFD1-201ENST00000263202 CYB5R2Q6BCY4 276 aa18.27■□□□□ 0.52
UFD1-201ENST00000263202 HYLS1Q96M11 299 aa18.27■□□□□ 0.52
UFD1-201ENST00000263202 COA4Q9NYJ1 87 aa18.27■□□□□ 0.52
UFD1-201ENST00000263202 SCGB1D2O95969 90 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 OR9G9P0C7N8 305 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 IGHV4-38-2P0DP08 117 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 GPR157Q5UAW9 335 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 RUSC1-AS1Q66K80 236 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 CCDC144NLQ6NUI1 221 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 C11orf87Q6NUJ2 197 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 OR1S1Q8NH92 325 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 HARBI1Q96MB7 349 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 TMEM140Q9NV12 185 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 H0YIZ8 118 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 RPS16P62249 146 aaKnown RBP18.26■□□□□ 0.51
UFD1-201ENST00000263202 CXorf66Q5JRM2 361 aaPredicted RBP18.26■□□□□ 0.51
UFD1-201ENST00000263202 OR4A47Q6IF82 309 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 AIFM2Q9BRQ8 373 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 RNF126Q9BV68 326 aa18.26■□□□□ 0.51
UFD1-201ENST00000263202 MS4A7Q9GZW8 240 aaPredicted RBP18.26■□□□□ 0.51
UFD1-201ENST00000263202 FAM90A9PA6NNJ1 464 aa18.25■□□□□ 0.51
UFD1-201ENST00000263202 CD1BP29016 333 aa18.25■□□□□ 0.51
UFD1-201ENST00000263202 NKX2-1P43699 371 aaPredicted RBP18.25■□□□□ 0.51
UFD1-201ENST00000263202 S100A10P60903 97 aa18.25■□□□□ 0.51
UFD1-201ENST00000263202 ID3Q02535 119 aa18.25■□□□□ 0.51
UFD1-201ENST00000263202 KLF17Q5JT82 389 aaPredicted RBP18.25■□□□□ 0.51
UFD1-201ENST00000263202 FOXRED2Q8IWF2 684 aa18.25■□□□□ 0.51
UFD1-201ENST00000263202 RITA1Q96K30 269 aa18.25■□□□□ 0.51
UFD1-201ENST00000263202 K7EPK0 472 aa18.24■□□□□ 0.51
UFD1-201ENST00000263202 NXPH3O95157 252 aa18.24■□□□□ 0.51
UFD1-201ENST00000263202 SLC25A4P12235 298 aa18.24■□□□□ 0.51
UFD1-201ENST00000263202 BRD3OSQ6XYD6 125 aa18.24■□□□□ 0.51
UFD1-201ENST00000263202 FAM71E2Q8N5Q1 922 aa18.24■□□□□ 0.51
UFD1-201ENST00000263202 GRPEL2Q8TAA5 225 aa18.24■□□□□ 0.51
UFD1-201ENST00000263202 THAP6Q8TBB0 222 aa18.24■□□□□ 0.51
UFD1-201ENST00000263202 LSM5Q9Y4Y9 91 aaKnown RBP18.24■□□□□ 0.51
UFD1-201ENST00000263202 POMT1Q9Y6A1 747 aa18.24■□□□□ 0.51
UFD1-201ENST00000263202 SMAD7O15105 426 aaKnown RBP18.23■□□□□ 0.51
UFD1-201ENST00000263202 ST8SIA3O43173 380 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 VENTXO95231 258 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 IL6RP08887 468 aaPredicted RBP18.23■□□□□ 0.51
UFD1-201ENST00000263202 ARHGDIBP52566 201 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.23■□□□□ 0.51
UFD1-201ENST00000263202 OR5AC2Q9NZP5 309 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 MBD2Q9UBB5 411 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 ITGB1BP2Q9UKP3 347 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 NSG2Q9Y328 171 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 ITPR3Q14573 2671 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 FXYD6-FXYD2A0A087WZ82 144 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 TRAV3A0A0B4J244 114 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 IGLV2-23P01705 113 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 SAA1P0DJI8 122 aaPredicted RBP18.23■□□□□ 0.51
UFD1-201ENST00000263202 RELBQ01201 579 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 PRSS54Q6PEW0 395 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 PUSL1Q8N0Z8 303 aaKnown RBP18.23■□□□□ 0.51
UFD1-201ENST00000263202 ZFP57Q9NU63 452 aa18.23■□□□□ 0.51
UFD1-201ENST00000263202 DEDDO75618 318 aa18.22■□□□□ 0.51
UFD1-201ENST00000263202 PET100P0DJ07 73 aa18.22■□□□□ 0.51
UFD1-201ENST00000263202 LYL1P12980 280 aa18.22■□□□□ 0.51
UFD1-201ENST00000263202 LGALS7P47929 136 aa18.22■□□□□ 0.51
UFD1-201ENST00000263202 BET1LQ9NYM9 111 aa18.22■□□□□ 0.51
UFD1-201ENST00000263202 TET2Q6N021 2002 aaPredicted RBP18.22■□□□□ 0.51
UFD1-201ENST00000263202 MAGT1Q9H0U3 335 aa18.21■□□□□ 0.51
UFD1-201ENST00000263202 RCL1Q9Y2P8 373 aaKnown RBP18.21■□□□□ 0.51
UFD1-201ENST00000263202 CCDC168Q8NDH2 2452 aa18.21■□□□□ 0.51
UFD1-201ENST00000263202 HMSDA8MTL9 139 aa18.21■□□□□ 0.51
UFD1-201ENST00000263202 RLN2P04090 185 aa18.21■□□□□ 0.51
UFD1-201ENST00000263202 OR2B8PP59922 312 aa18.21■□□□□ 0.51
UFD1-201ENST00000263202 POLR2GP62487 172 aaKnown RBP eCLIP18.21■□□□□ 0.51
UFD1-201ENST00000263202 AARDQ4LEZ3 155 aa18.21■□□□□ 0.51
UFD1-201ENST00000263202 OR4A16Q8NH70 328 aa18.21■□□□□ 0.51
UFD1-201ENST00000263202 FAM90A26D6RGX4 464 aa18.2■□□□□ 0.5
UFD1-201ENST00000263202 IGKV1D-33P01593 117 aa18.2■□□□□ 0.5
UFD1-201ENST00000263202 IGKV1-33P01594 117 aa18.2■□□□□ 0.5
UFD1-201ENST00000263202 CD24P25063 80 aa18.2■□□□□ 0.5
UFD1-201ENST00000263202 TMEM65Q6PI78 240 aa18.2■□□□□ 0.5
UFD1-201ENST00000263202 ZNF546Q86UE3 836 aa18.2■□□□□ 0.5
UFD1-201ENST00000263202 RNF5Q99942 180 aa18.2■□□□□ 0.5
UFD1-201ENST00000263202 QTRT1Q9BXR0 403 aaKnown RBP18.2■□□□□ 0.5
UFD1-201ENST00000263202 HSPB7Q9UBY9 170 aa18.2■□□□□ 0.5
UFD1-201ENST00000263202 SVEP1Q4LDE5 3571 aa18.19■□□□□ 0.5
UFD1-201ENST00000263202 A0A0U1RQK1 487 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms